Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650055.1_202016-05-23] 234 sequences; 6,630,005 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq52 196 1e-47 >seq52 Length=5336 Score = 196 bits (216), Expect = 1e-47 Identities = 260/355 (73%), Gaps = 12/355 (3%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||||||| | |||| |||||| ||| ||| || |||||||| ||||||||||| Sbjct 1415 ATCTTCACAGATATTATTATTTCATTGAGATTATCTTTAAGACAGTGTTCAAATCGTTAC 1474 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1475 GTCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTCGGACCGTTATG 1534 Query 129 GTTACGGCCGCCGTTT-ACTGGGGCTTAAGTTCACTGCTTCGATTG-CTCTAACAGATCC 186 ||| |||||||||| ||| | | ||| | | | |||| | ||||| | Sbjct 1535 AATACAGCCGCCGTTTAACTAGAGTTTA---TTAAAATATATATTGTATTTAACA-TTTT 1590 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 || || | | || || |||||| |||||||| |||||||| | | |||| ||| Sbjct 1591 TATTCACTTACTAGAACTGGGCAGACGTCAGCTTTTATACATCATTATTAAACTTTGCAA 1650 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGACAG 306 || | |||||||||| |||||||||| ||| || | | | | || ||| ||| Sbjct 1651 AAGCTTGTGTTTTTGATAAACAGTCGTTTGAACCAAGTATATATTGC---TCAAAGA--- 1704 Query 307 GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTT 361 ||| | || |||||||||||| | ||| |||||| |||||||||| ||| || Sbjct 1705 GCATTCTTTATCCCTAAGTTACAGAATCAATTTGCCTAGTTCCTTAAAGATAATT 1759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062397513984