Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650055.1_202016-05-23] 234 sequences; 6,630,005 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq231 100 2e-16 >seq231 Length=155543 Score = 100 bits (110), Expect = 2e-16 Identities = 370/577 (64%), Gaps = 2/577 (0%) Strand=Plus/Minus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 ||| |||| || | || || || |||||||| || || || | || | ||||| ||| Sbjct 72527 ACATACTTTGGCAATGCTAGTGAAGCGAGGTTACACACTGCAACTTCATTAGGAGATGTA 72468 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 || | ||||| ||| ||| | || || | || || || | |||| ||||| Sbjct 72467 TATTGCACAATCTCGCAGCATAAGTTGCTAGACTTAATAGTACCTATGTTCTTCTGATTT 72408 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 |||| ||| || || |||||||| | |||||| ||||| || || |||| ||| || Sbjct 72407 GACTTGTAATTACAAGCGTCCTTGTATAACATGTAAGGAGTTCCTGTTTCAATTTGCGAT 72348 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCC-TACCTTTGCG 66231 | | ||| || |||||| | | || || || | | ||| | ||||| Sbjct 72347 TGTAAGATAGCAAACCAAAGGGTTTGCGCGGGAACTGTTT-TGCGACCCATGCCTTTCGA 72289 Query 66232 TTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACA 66291 || ||| ||| | | ||| || || ||||| || | || | | ||| Sbjct 72288 CTCATAACTAGTGTATAATTTTTCAAATTCCTCTCCCCAAACCTGATCTAGTCCTCTACA 72229 Query 66292 CTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATC 66351 || | ||| ||||||| | ||| | ||| ||| || | ||| || || || Sbjct 72228 CTCATCTGGGCACATCAAAGTCCAGTTTTCATTAGCTTCAACCCTTTTCATGAAAAGGTC 72169 Query 66352 AGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTT 66411 || ||||| | || ||||| | || | || | | |||||| || || ||||| Sbjct 72168 TGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTTGACTCCTCTGAACCATGGTTTTT 72109 Query 66412 GCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGA 66471 || | || ||||| ||||| || || ||||||||||| || ||||||||||| || || Sbjct 72108 TCGTAGATCTAGGAATTCAAAAATATCAGCATGCCATGGCTCTAGGTAGATGGCAAATGA 72049 Query 66472 GCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAA 66531 || | | ||| || || || || || || || ||||| || ||||| | | | Sbjct 72048 ACCTTTTCTTTTTCCCCCTCCCTGATCAACATAACGAGCAGTATCATTGAATATTCTGAG 71989 Query 66532 CATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568 ||| |||| | ||| || || | ||||| |||||| Sbjct 71988 CATAGGTATAATCCCATTGGAATGCCCATTTGTGCCG 71952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566866185760