Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650065.1_202016-05-23] 82 sequences; 6,346,114 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq58 84.2 9e-11 seq43 84.2 9e-11 >seq58 Length=597893 Score = 84.2 bits (92), Expect = 9e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 249647 TGGCCGAGCGGTCCAAGGTGCCAGACTCAAGTTCTGGTGTGTGCTTACACGCGTGGGTTC 249706 |||||||||||||||||| |||||||||||||||||||| | | | | ||||||||| Sbjct 534799 TGGCCGAGCGGTCCAAGGCGCCAGACTCAAGTTCTGGTGGGCGAGAGCCCTCGTGGGTTC 534858 Query 249707 AAATCCCAC 249715 ||||||||| Sbjct 534859 AAATCCCAC 534867 >seq43 Length=44977 Score = 84.2 bits (92), Expect = 9e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||| | ||| | ||| ||||| ||||| |||| | ||||| || |||||||| Sbjct 39480 CTCCTTGAGCCGGGGTACGCCTAGGGTGACGTTTTTGGAGCCTACGCCTGCGAAGTGGAA 39539 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | || |||| |||||| ||| || ||||| |||| | |||| | |||||| Sbjct 39540 GGTGTTTAGCGTCATTTGCGTGGCGGGTTCTCCGATCGACTGCGCGGCGATGGCGCCTAC 39599 Query 349204 CATCTCGCCGG 349214 |||||||| Sbjct 39600 GCACTCGCCGG 39610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084736956299436