Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq237 271 1e-70 seq156 271 1e-70 seq155 271 1e-70 >seq237 Length=221212 Score = 271 bits (300), Expect = 1e-70 Identities = 201/231 (87%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||| | |||||| |||||||||||| ||||||| ||| | Sbjct 215704 GTACAAAGGGCAGGGACGTAGTCGGCACGAGCT-GATGACTCGCGCCTACTAGGCATT-C 215647 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| |||| || ||||||||| ||||||||||||||||||| | | ||||||| Sbjct 215646 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCATACTGTAAGATTA 215587 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||||||| | ||||||||| | | ||||||||||| |||||||||||||||||||| | Sbjct 215586 CCCGGACCCGACGGCCAAGG--AAAAACTCGTTGAATGCATCAGTGTAGCGCGCGTGCAG 215529 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||| ||||||||||||||||||||||||||||||||| | |||||| || Sbjct 215528 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTTACACTTCCTTG 215478 >seq156 Length=19347 Score = 271 bits (300), Expect = 1e-70 Identities = 201/231 (87%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||| | |||||| |||||||||||| ||||||| ||| | Sbjct 15714 GTACAAAGGGCAGGGACGTAGTCGGCACGAGCT-GATGACTCGCGCCTACTAGGCATT-C 15771 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| |||| || ||||||||| ||||||||||||||||||| | | ||||||| Sbjct 15772 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCATACTGTAAGATTA 15831 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||||||| | ||||||||| | | ||||||||||| |||||||||||||||||||| | Sbjct 15832 CCCGGACCCGACGGCCAAGG--AAAAACTCGTTGAATGCATCAGTGTAGCGCGCGTGCAG 15889 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||| ||||||||||||||||||||||||||||||||| | |||||| || Sbjct 15890 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTTACACTTCCTTG 15940 >seq155 Length=11303 Score = 271 bits (300), Expect = 1e-70 Identities = 201/231 (87%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||| | |||||| |||||||||||| ||||||| ||| | Sbjct 3634 GTACAAAGGGCAGGGACGTAGTCGGCACGAGCT-GATGACTCGCGCCTACTAGGCATT-C 3577 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| |||| || ||||||||| ||||||||||||||||||| | | ||||||| Sbjct 3576 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCATACTGTAAGATTA 3517 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||||||| | ||||||||| | | ||||||||||| |||||||||||||||||||| | Sbjct 3516 CCCGGACCCGACGGCCAAGG--AAAAACTCGTTGAATGCATCAGTGTAGCGCGCGTGCAG 3459 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||| ||||||||||||||||||||||||||||||||| | |||||| || Sbjct 3458 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTTACACTTCCTTG 3408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751998178750