Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq237 125 4e-27 seq156 125 4e-27 seq155 125 4e-27 >seq237 Length=221212 Score = 125 bits (138), Expect = 4e-27 Identities = 101/121 (83%), Gaps = 7/121 (6%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTC----AAAATGATAACATC 56 ||||||||||||||||||||||| ||||||| || ||||| ||| ||| || || Sbjct 215169 GAACCCAAAGACTTTGATTTCTCTCAAGGTGCTGAAGGAGTCGTTTAAACTGACGACCTC 215110 Query 57 GCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 | ||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 215109 ---CAATCTCTAGTCGGCATAGTTTATGGTTAGGACTACGACGGTATCTGATCGTCTTCG 215053 Query 117 A 117 | Sbjct 215052 A 215052 >seq156 Length=19347 Score = 125 bits (138), Expect = 4e-27 Identities = 101/121 (83%), Gaps = 7/121 (6%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTC----AAAATGATAACATC 56 ||||||||||||||||||||||| ||||||| || ||||| ||| ||| || || Sbjct 16249 GAACCCAAAGACTTTGATTTCTCTCAAGGTGCTGAAGGAGTCGTTTAAACTGACGACCTC 16308 Query 57 GCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 | ||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 16309 ---CAATCTCTAGTCGGCATAGTTTATGGTTAGGACTACGACGGTATCTGATCGTCTTCG 16365 Query 117 A 117 | Sbjct 16366 A 16366 >seq155 Length=11303 Score = 125 bits (138), Expect = 4e-27 Identities = 101/121 (83%), Gaps = 7/121 (6%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTC----AAAATGATAACATC 56 ||||||||||||||||||||||| ||||||| || ||||| ||| ||| || || Sbjct 3099 GAACCCAAAGACTTTGATTTCTCTCAAGGTGCTGAAGGAGTCGTTTAAACTGACGACCTC 3040 Query 57 GCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 | ||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 3039 ---CAATCTCTAGTCGGCATAGTTTATGGTTAGGACTACGACGGTATCTGATCGTCTTCG 2983 Query 117 A 117 | Sbjct 2982 A 2982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399347500