Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq237 224 2e-56 seq156 224 2e-56 seq155 224 2e-56 >seq237 Length=221212 Score = 224 bits (248), Expect = 2e-56 Identities = 206/254 (81%), Gaps = 6/254 (2%) Strand=Plus/Plus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACAT 124 |||||| |||||||||| |||| ||||||||| || ||||| || || | |||||| Sbjct 214802 CCAGGA--TTTACTTTGAGAAAACTAGAGTGTTTCAAACAGGCATTCGCCTTGAATACTA 214859 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||| | |||||| | |||||||||||||||||| | | | | || Sbjct 214860 CAGCATGGAATAATGAAGTAGGACTTT-GGTTCTATTTTGTTGGTTATTGAGCCAGA-GT 214917 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 |||| |||||||| ||| ||||| | ||||| || ||||||||||||||||||| | Sbjct 214918 AATGGTTAATAGGAGCAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAG 214977 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 |||| || ||||| ||||||||||||||| || |||||||||||||||||||||| || Sbjct 214978 ATTTGTTAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGA 215036 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 215037 ACGAAAGTTAGGGG 215050 >seq156 Length=19347 Score = 224 bits (248), Expect = 2e-56 Identities = 206/254 (81%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACAT 124 |||||| |||||||||| |||| ||||||||| || ||||| || || | |||||| Sbjct 16616 CCAGGA--TTTACTTTGAGAAAACTAGAGTGTTTCAAACAGGCATTCGCCTTGAATACTA 16559 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||| | |||||| | |||||||||||||||||| | | | | || Sbjct 16558 CAGCATGGAATAATGAAGTAGGACTTT-GGTTCTATTTTGTTGGTTATTGAGCCAGA-GT 16501 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 |||| |||||||| ||| ||||| | ||||| || ||||||||||||||||||| | Sbjct 16500 AATGGTTAATAGGAGCAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAG 16441 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 |||| || ||||| ||||||||||||||| || |||||||||||||||||||||| || Sbjct 16440 ATTTGTTAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGA 16382 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 16381 ACGAAAGTTAGGGG 16368 >seq155 Length=11303 Score = 224 bits (248), Expect = 2e-56 Identities = 206/254 (81%), Gaps = 6/254 (2%) Strand=Plus/Plus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACAT 124 |||||| |||||||||| |||| ||||||||| || ||||| || || | |||||| Sbjct 2732 CCAGGA--TTTACTTTGAGAAAACTAGAGTGTTTCAAACAGGCATTCGCCTTGAATACTA 2789 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||| | |||||| | |||||||||||||||||| | | | | || Sbjct 2790 CAGCATGGAATAATGAAGTAGGACTTT-GGTTCTATTTTGTTGGTTATTGAGCCAGA-GT 2847 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 |||| |||||||| ||| ||||| | ||||| || ||||||||||||||||||| | Sbjct 2848 AATGGTTAATAGGAGCAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAG 2907 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 |||| || ||||| ||||||||||||||| || |||||||||||||||||||||| || Sbjct 2908 ATTTGTTAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGA 2966 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 2967 ACGAAAGTTAGGGG 2980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915197712000