Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq237 284 2e-74 seq156 284 2e-74 seq155 284 2e-74 >seq237 Length=221212 Score = 284 bits (314), Expect = 2e-74 Identities = 226/267 (85%), Gaps = 11/267 (4%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 215562 ACTCGTTGAATGCATCAGTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGA 215503 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTG---GAAGCCAATAGTCCCTCTAAGAAGCCA 118 ||||||||||||| | |||||| | | | ||| ||| |||||||||||||||| | Sbjct 215502 CCTGTTATTGCCTTACACTTCCTTGCGTTTTATGAACGCAA-AGTCCCTCTAAGAAGCGA 215444 Query 119 GCCACCAAC--CATAG----TCGATGGGGCTA-TTTAGCAGGTTAAGGTCTCGTTCGTTA 171 | ||| || || || | ||| ||||||||||||||||||||||||||| Sbjct 215443 TACTGGAACAGCAAAGCTTGTCCCAGATCCTAATTTAGCAGGTTAAGGTCTCGTTCGTTA 215384 Query 172 TCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATA 231 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 215383 ACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATA 215324 Query 232 GAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||| Sbjct 215323 GAATCAAGAAAGAGCTATCAATCTGTC 215297 >seq156 Length=19347 Score = 284 bits (314), Expect = 2e-74 Identities = 226/267 (85%), Gaps = 11/267 (4%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 15856 ACTCGTTGAATGCATCAGTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGA 15915 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTG---GAAGCCAATAGTCCCTCTAAGAAGCCA 118 ||||||||||||| | |||||| | | | ||| ||| |||||||||||||||| | Sbjct 15916 CCTGTTATTGCCTTACACTTCCTTGCGTTTTATGAACGCAA-AGTCCCTCTAAGAAGCGA 15974 Query 119 GCCACCAAC--CATAG----TCGATGGGGCTA-TTTAGCAGGTTAAGGTCTCGTTCGTTA 171 | ||| || || || | ||| ||||||||||||||||||||||||||| Sbjct 15975 TACTGGAACAGCAAAGCTTGTCCCAGATCCTAATTTAGCAGGTTAAGGTCTCGTTCGTTA 16034 Query 172 TCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATA 231 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16035 ACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATA 16094 Query 232 GAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||| Sbjct 16095 GAATCAAGAAAGAGCTATCAATCTGTC 16121 >seq155 Length=11303 Score = 284 bits (314), Expect = 2e-74 Identities = 226/267 (85%), Gaps = 11/267 (4%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 3492 ACTCGTTGAATGCATCAGTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGA 3433 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTG---GAAGCCAATAGTCCCTCTAAGAAGCCA 118 ||||||||||||| | |||||| | | | ||| ||| |||||||||||||||| | Sbjct 3432 CCTGTTATTGCCTTACACTTCCTTGCGTTTTATGAACGCAA-AGTCCCTCTAAGAAGCGA 3374 Query 119 GCCACCAAC--CATAG----TCGATGGGGCTA-TTTAGCAGGTTAAGGTCTCGTTCGTTA 171 | ||| || || || | ||| ||||||||||||||||||||||||||| Sbjct 3373 TACTGGAACAGCAAAGCTTGTCCCAGATCCTAATTTAGCAGGTTAAGGTCTCGTTCGTTA 3314 Query 172 TCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATA 231 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3313 ACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATA 3254 Query 232 GAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||| Sbjct 3253 GAATCAAGAAAGAGCTATCAATCTGTC 3227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798070250