Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq237 367 2e-99 seq156 367 2e-99 seq155 367 2e-99 >seq237 Length=221212 Score = 367 bits (406), Expect = 2e-99 Identities = 257/293 (88%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| | ||||| | | ||| | ||||||||||||||||||||||||||||||| Sbjct 219603 TACTAAGTTGGATTACTGTCGCAGCGTCAGTCATCAGTAGGGTAAAACTAACCTGTCTCA 219544 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||| ||||||||||||| || ||| || Sbjct 219543 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGCGGGTGAACAATCCGACACTTTGAGA 219484 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 219483 CATCTGCATCTCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 219424 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 219423 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTG 219364 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||||||| | ||||||||||||||||||| |||||| |||||||||| Sbjct 219363 TAAATTTCACAGTTCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 219311 >seq156 Length=19347 Score = 367 bits (406), Expect = 2e-99 Identities = 257/293 (88%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| | ||||| | | ||| | ||||||||||||||||||||||||||||||| Sbjct 11815 TACTAAGTTGGATTACTGTCGCAGCGTCAGTCATCAGTAGGGTAAAACTAACCTGTCTCA 11874 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||| ||||||||||||| || ||| || Sbjct 11875 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGCGGGTGAACAATCCGACACTTTGAGA 11934 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11935 CATCTGCATCTCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 11994 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 11995 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTG 12054 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||||||| | ||||||||||||||||||| |||||| |||||||||| Sbjct 12055 TAAATTTCACAGTTCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 12107 >seq155 Length=11303 Score = 367 bits (406), Expect = 2e-99 Identities = 257/293 (88%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| | ||||| | | ||| | ||||||||||||||||||||||||||||||| Sbjct 7533 TACTAAGTTGGATTACTGTCGCAGCGTCAGTCATCAGTAGGGTAAAACTAACCTGTCTCA 7474 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||| ||||||||||||| || ||| || Sbjct 7473 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGCGGGTGAACAATCCGACACTTTGAGA 7414 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7413 CATCTGCATCTCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 7354 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 7353 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTG 7294 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||||||| | ||||||||||||||||||| |||||| |||||||||| Sbjct 7293 TAAATTTCACAGTTCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 7241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854397864000