Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq237 111 2e-22 seq156 111 2e-22 seq155 111 2e-22 >seq237 Length=221212 Score = 111 bits (122), Expect = 2e-22 Identities = 140/188 (74%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC-TCGAATACAT 63 |||||| |||||||||| |||| ||||| ||| || ||||| || || | |||||| Sbjct 214802 CCAGGA--TTTACTTTGAGAAAACTAGAGTGTTTCAAACAGGCATTCGCCTTGAATACTA 214859 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 | ||||||||||| | |||||| | ||||||||||||| |||| | | | | | Sbjct 214860 CAGCATGGAATAATGAAGTAGGACTTT-GGTTCTATTTTGTTGGTTATTGAGCCAGA--G 214916 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||| | |||| | ||| ||||| | ||||| || ||||| ||||||||||||| Sbjct 214917 TAATGGTTAATAGGAGCAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTA 214976 Query 184 GATTTATT 191 ||||| || Sbjct 214977 GATTTGTT 214984 >seq156 Length=19347 Score = 111 bits (122), Expect = 2e-22 Identities = 140/188 (74%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC-TCGAATACAT 63 |||||| |||||||||| |||| ||||| ||| || ||||| || || | |||||| Sbjct 16616 CCAGGA--TTTACTTTGAGAAAACTAGAGTGTTTCAAACAGGCATTCGCCTTGAATACTA 16559 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 | ||||||||||| | |||||| | ||||||||||||| |||| | | | | | Sbjct 16558 CAGCATGGAATAATGAAGTAGGACTTT-GGTTCTATTTTGTTGGTTATTGAGCCAGA--G 16502 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||| | |||| | ||| ||||| | ||||| || ||||| ||||||||||||| Sbjct 16501 TAATGGTTAATAGGAGCAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTA 16442 Query 184 GATTTATT 191 ||||| || Sbjct 16441 GATTTGTT 16434 >seq155 Length=11303 Score = 111 bits (122), Expect = 2e-22 Identities = 140/188 (74%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC-TCGAATACAT 63 |||||| |||||||||| |||| ||||| ||| || ||||| || || | |||||| Sbjct 2732 CCAGGA--TTTACTTTGAGAAAACTAGAGTGTTTCAAACAGGCATTCGCCTTGAATACTA 2789 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 | ||||||||||| | |||||| | ||||||||||||| |||| | | | | | Sbjct 2790 CAGCATGGAATAATGAAGTAGGACTTT-GGTTCTATTTTGTTGGTTATTGAGCCAGA--G 2846 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||| | |||| | ||| ||||| | ||||| || ||||| ||||||||||||| Sbjct 2847 TAATGGTTAATAGGAGCAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTA 2906 Query 184 GATTTATT 191 ||||| || Sbjct 2907 GATTTGTT 2914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511998760000