Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq237 250 5e-64 seq156 250 5e-64 seq155 250 5e-64 >seq237 Length=221212 Score = 250 bits (276), Expect = 5e-64 Identities = 254/323 (79%), Gaps = 21/323 (7%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAAT----AGCCAGGCCC-GCTTTGGCGGGTCGCCG---- 70 || ||||||||||||||||||||| | | || | |||||| | | || | | Sbjct 215388 GAACGAGACCTTAACCTGCTAAATTAGGATCTGGGACAAGCTTTG-CTGTTC-CAGTATC 215445 Query 71 GCTTCTTAGAGGGACTATCGGCTCA---AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||||||||| | | ||| | | | |||||| | |||||||||||||||| Sbjct 215446 GCTTCTTAGAGGGACTTTGCGTTCATAAAACGCAAGGAAGTGTAAGGCAATAACAGGTCT 215505 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187 ||||||||||||||||| |||||| |||||||||||||||||| | ||||||||| Sbjct 215506 GTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTACACTGATGCATTCAACGAGTTTT 215565 Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG--TCGTGCTGGGGATAGAG 245 || |||||||| |||| |||||||||| | | | || ||||| |||||||||| Sbjct 215566 TC--CTTGGCCGTCGGGTCCGGGTAATCTT---ACAGTATGCATCGTGATGGGGATAGAT 215620 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 |||||||||||| |||| |||||||||||||||||| ||||| ||||||||| || | Sbjct 215621 TATTGCAATTATTAATCTTGAACGAGGAATGCCTAGTAGGCGCGAGTCATCAGCTCGTGC 215680 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 || ||||||||||||||||||| Sbjct 215681 CGACTACGTCCCTGCCCTTTGTA 215703 >seq156 Length=19347 Score = 250 bits (276), Expect = 5e-64 Identities = 254/323 (79%), Gaps = 21/323 (7%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAAT----AGCCAGGCCC-GCTTTGGCGGGTCGCCG---- 70 || ||||||||||||||||||||| | | || | |||||| | | || | | Sbjct 16030 GAACGAGACCTTAACCTGCTAAATTAGGATCTGGGACAAGCTTTG-CTGTTC-CAGTATC 15973 Query 71 GCTTCTTAGAGGGACTATCGGCTCA---AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||||||||| | | ||| | | | |||||| | |||||||||||||||| Sbjct 15972 GCTTCTTAGAGGGACTTTGCGTTCATAAAACGCAAGGAAGTGTAAGGCAATAACAGGTCT 15913 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187 ||||||||||||||||| |||||| |||||||||||||||||| | ||||||||| Sbjct 15912 GTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTACACTGATGCATTCAACGAGTTTT 15853 Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG--TCGTGCTGGGGATAGAG 245 || |||||||| |||| |||||||||| | | | || ||||| |||||||||| Sbjct 15852 TC--CTTGGCCGTCGGGTCCGGGTAATCTT---ACAGTATGCATCGTGATGGGGATAGAT 15798 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 |||||||||||| |||| |||||||||||||||||| ||||| ||||||||| || | Sbjct 15797 TATTGCAATTATTAATCTTGAACGAGGAATGCCTAGTAGGCGCGAGTCATCAGCTCGTGC 15738 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 || ||||||||||||||||||| Sbjct 15737 CGACTACGTCCCTGCCCTTTGTA 15715 >seq155 Length=11303 Score = 250 bits (276), Expect = 5e-64 Identities = 254/323 (79%), Gaps = 21/323 (7%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAAT----AGCCAGGCCC-GCTTTGGCGGGTCGCCG---- 70 || ||||||||||||||||||||| | | || | |||||| | | || | | Sbjct 3318 GAACGAGACCTTAACCTGCTAAATTAGGATCTGGGACAAGCTTTG-CTGTTC-CAGTATC 3375 Query 71 GCTTCTTAGAGGGACTATCGGCTCA---AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||||||||| | | ||| | | | |||||| | |||||||||||||||| Sbjct 3376 GCTTCTTAGAGGGACTTTGCGTTCATAAAACGCAAGGAAGTGTAAGGCAATAACAGGTCT 3435 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187 ||||||||||||||||| |||||| |||||||||||||||||| | ||||||||| Sbjct 3436 GTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTACACTGATGCATTCAACGAGTTTT 3495 Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG--TCGTGCTGGGGATAGAG 245 || |||||||| |||| |||||||||| | | | || ||||| |||||||||| Sbjct 3496 TC--CTTGGCCGTCGGGTCCGGGTAATCTT---ACAGTATGCATCGTGATGGGGATAGAT 3550 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 |||||||||||| |||| |||||||||||||||||| ||||| ||||||||| || | Sbjct 3551 TATTGCAATTATTAATCTTGAACGAGGAATGCCTAGTAGGCGCGAGTCATCAGCTCGTGC 3610 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 || ||||||||||||||||||| Sbjct 3611 CGACTACGTCCCTGCCCTTTGTA 3633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947197632000