Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq237 120 5e-25 seq156 120 5e-25 seq155 120 5e-25 >seq237 Length=221212 Score = 120 bits (132), Expect = 5e-25 Identities = 99/118 (84%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| ||||||||| ||||||| ||| || ||| Sbjct 219601 GTACGAGAGGAACAGTTGG-TTCAGA-TAATTGGTTAATGCGGCTAGTTGAAAAGCTAGT 219658 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||| |||| |||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 219659 GCCGCGACGCTATCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 219716 >seq156 Length=19347 Score = 120 bits (132), Expect = 5e-25 Identities = 99/118 (84%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| ||||||||| ||||||| ||| || ||| Sbjct 11817 GTACGAGAGGAACAGTTGG-TTCAGA-TAATTGGTTAATGCGGCTAGTTGAAAAGCTAGT 11760 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||| |||| |||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 11759 GCCGCGACGCTATCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 11702 >seq155 Length=11303 Score = 120 bits (132), Expect = 5e-25 Identities = 99/118 (84%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| ||||||||| ||||||| ||| || ||| Sbjct 7531 GTACGAGAGGAACAGTTGG-TTCAGA-TAATTGGTTAATGCGGCTAGTTGAAAAGCTAGT 7588 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||| |||| |||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 7589 GCCGCGACGCTATCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 7646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198016000