Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq237 526 7e-147 seq156 526 7e-147 seq155 526 7e-147 >seq237 Length=221212 Score = 526 bits (582), Expect = 7e-147 Identities = 423/500 (85%), Gaps = 18/500 (4%) Strand=Plus/Minus Query 5 TCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCC 64 |||||||||||||||||| || ||||||||| ||||| ||||||||||||||| Sbjct 214595 TCATTCCAATTACAAGACTTTAA---GCCCTGTATTGTTATTTCTTGTCACTACCTCCCT 214539 Query 65 GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 124 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 214538 GTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTCTC 214479 Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCC 184 ||||||||||||||||||||||||| |||||||||| |||||| | || |||||||| Sbjct 214478 AGGCTCCCTCTCCGGAATCGAACCCCAATTCCCCGTCACCCGTCGTCGCCCCGGTAGGCC 214419 Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAG 244 | || |||||| || |||| ||||||| |||||| |||||||| ||||||||| ||| Sbjct 214418 AATACCCTACCGTCCAAAGCTGATAGGTCAGAAACTTGAATGATACATCGCCGG--CAAA 214361 Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTT 304 ||||||||||||| ||| ||||||||||||||| | | |||||||| ||||| || Sbjct 214360 GCCATGCGATTCGCTAATTTATTATGAATCACCGATTA--CCCGAAGG--GTTGG-TTAA 214306 Query 305 TATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATT 364 |||||||| || || |||| | | | | ||||||||||||| |||||||| Sbjct 214305 AGTCTAATAA----ACGCCACGCGAAAAC-GCGCCTCGAGCATGTATTAGCCCTAGAATT 214251 Query 365 ACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 424 |||||||||||||||||| || | || ||||||||||| ||||||| |||||||||||| Sbjct 214250 ACCACGGTTATCCATGTA-AAACGAAC-ATCAAATAAACTATAACTGTTTTAATGAGCCA 214193 Query 425 TTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 484 ||||||||||| ||||||| | ||||||||| |||||||||||||||||||||| |||| Sbjct 214192 TTCGCAGTTTCGCTGTATA-AAAGCTTATACTAAGACATGCATGGCTTAATCTTTAAGAC 214134 Query 485 AAGCATATGACTACTGGCAG 504 |||||||||||||||||||| Sbjct 214133 AAGCATATGACTACTGGCAG 214114 >seq156 Length=19347 Score = 526 bits (582), Expect = 7e-147 Identities = 423/500 (85%), Gaps = 18/500 (4%) Strand=Plus/Plus Query 5 TCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCC 64 |||||||||||||||||| || ||||||||| ||||| ||||||||||||||| Sbjct 16823 TCATTCCAATTACAAGACTTTAA---GCCCTGTATTGTTATTTCTTGTCACTACCTCCCT 16879 Query 65 GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 124 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 16880 GTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTCTC 16939 Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCC 184 ||||||||||||||||||||||||| |||||||||| |||||| | || |||||||| Sbjct 16940 AGGCTCCCTCTCCGGAATCGAACCCCAATTCCCCGTCACCCGTCGTCGCCCCGGTAGGCC 16999 Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAG 244 | || |||||| || |||| ||||||| |||||| |||||||| ||||||||| ||| Sbjct 17000 AATACCCTACCGTCCAAAGCTGATAGGTCAGAAACTTGAATGATACATCGCCGG--CAAA 17057 Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTT 304 ||||||||||||| ||| ||||||||||||||| | | |||||||| ||||| || Sbjct 17058 GCCATGCGATTCGCTAATTTATTATGAATCACCGATTA--CCCGAAGG--GTTGG-TTAA 17112 Query 305 TATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATT 364 |||||||| || || |||| | | | | ||||||||||||| |||||||| Sbjct 17113 AGTCTAATAA----ACGCCACGCGAAAAC-GCGCCTCGAGCATGTATTAGCCCTAGAATT 17167 Query 365 ACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 424 |||||||||||||||||| || | || ||||||||||| ||||||| |||||||||||| Sbjct 17168 ACCACGGTTATCCATGTA-AAACGAAC-ATCAAATAAACTATAACTGTTTTAATGAGCCA 17225 Query 425 TTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 484 ||||||||||| ||||||| | ||||||||| |||||||||||||||||||||| |||| Sbjct 17226 TTCGCAGTTTCGCTGTATA-AAAGCTTATACTAAGACATGCATGGCTTAATCTTTAAGAC 17284 Query 485 AAGCATATGACTACTGGCAG 504 |||||||||||||||||||| Sbjct 17285 AAGCATATGACTACTGGCAG 17304 >seq155 Length=11303 Score = 526 bits (582), Expect = 7e-147 Identities = 423/500 (85%), Gaps = 18/500 (4%) Strand=Plus/Minus Query 5 TCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCC 64 |||||||||||||||||| || ||||||||| ||||| ||||||||||||||| Sbjct 2525 TCATTCCAATTACAAGACTTTAA---GCCCTGTATTGTTATTTCTTGTCACTACCTCCCT 2469 Query 65 GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 124 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 2468 GTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTCTC 2409 Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCC 184 ||||||||||||||||||||||||| |||||||||| |||||| | || |||||||| Sbjct 2408 AGGCTCCCTCTCCGGAATCGAACCCCAATTCCCCGTCACCCGTCGTCGCCCCGGTAGGCC 2349 Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAG 244 | || |||||| || |||| ||||||| |||||| |||||||| ||||||||| ||| Sbjct 2348 AATACCCTACCGTCCAAAGCTGATAGGTCAGAAACTTGAATGATACATCGCCGG--CAAA 2291 Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTT 304 ||||||||||||| ||| ||||||||||||||| | | |||||||| ||||| || Sbjct 2290 GCCATGCGATTCGCTAATTTATTATGAATCACCGATTA--CCCGAAGG--GTTGG-TTAA 2236 Query 305 TATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATT 364 |||||||| || || |||| | | | | ||||||||||||| |||||||| Sbjct 2235 AGTCTAATAA----ACGCCACGCGAAAAC-GCGCCTCGAGCATGTATTAGCCCTAGAATT 2181 Query 365 ACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 424 |||||||||||||||||| || | || ||||||||||| ||||||| |||||||||||| Sbjct 2180 ACCACGGTTATCCATGTA-AAACGAAC-ATCAAATAAACTATAACTGTTTTAATGAGCCA 2123 Query 425 TTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 484 ||||||||||| ||||||| | ||||||||| |||||||||||||||||||||| |||| Sbjct 2122 TTCGCAGTTTCGCTGTATA-AAAGCTTATACTAAGACATGCATGGCTTAATCTTTAAGAC 2064 Query 485 AAGCATATGACTACTGGCAG 504 |||||||||||||||||||| Sbjct 2063 AAGCATATGACTACTGGCAG 2044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510396224000