Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq109 203 1e-49 >seq109 Length=191926 Score = 203 bits (224), Expect = 1e-49 Identities = 222/290 (77%), Gaps = 14/290 (5%) Strand=Plus/Plus Query 401 TAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG 460 ||| || ||||||||| |||||||||||||||||||| || || |||||||||||||| Sbjct 176851 TAACCGACCCGTCTTGAAACACGGACCAAGGAGTCTAGCACCTGTGCGAGTGTTTGGGCT 176910 Query 461 TCAAACCCGTGCGCGTAATGAAAGTGA----ACGGAGG--TGGGAACCCGTGAGGGT-GC 513 || ||||| |||| ||||||||||| | ||| | ||||| | | || || Sbjct 176911 GAAACCCCGTACGCGAAATGAAAGTGATAACAGGGATGCGTGGGATTTTTTCCGCGTTGC 176970 Query 514 ACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACC 573 ||| | |||| || | ||| ||| | ||||| |||||||| || | ||||| Sbjct 176971 ACCTGTGGCCGA-CCGCAAGTCG-CGGCT-----TGAGTCAGAGCATATGTGCTAGGACC 177023 Query 574 CGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTC 633 |||||||||||||||||||||||| |||| ||||| ||| |||| ||| |||||| | Sbjct 177024 CGAAAGATGGTGAACTATGCCTGAGTAGGATGAAGTCAGGCGAAAGCCTGATGGAGGTCC 177083 Query 634 GCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| | ||| ||||||||||| |||||||| |||||||||||||||| Sbjct 177084 GTCGCGATACTGACGTGCAAATCGTTCGTCAAACTTGGGTATAGGGGCGA 177133 Score = 114 bits (126), Expect = 5e-23 Identities = 128/170 (75%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| | | ||||||| || || | || | | | |||||||| ||| |||||| Sbjct 176457 GAGTCGTGCTCTTTGGGATTGGAGTGCAAATAGTGTGATAAATTTCACATAAGACTAAAT 176516 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| |||||||||||| | ||||| |||| ||||||||||||| |||||| || Sbjct 176517 ACTGGTGTGAGACCGATAGCTAATAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAA 176576 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCA 209 |||| ||| ||||| || ||||| || ||| | ||||||| ||| |||| Sbjct 176577 AGAGGGTT-AAAAGTACCTGAAACTGCTGAGAAGGAAGCGATTGGGACCA 176625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079996997000