Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq109 598 1e-168 >seq109 Length=191926 Score = 598 bits (662), Expect = 1e-168 Identities = 451/526 (86%), Gaps = 15/526 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||| ||| |||| |||||||||| ||||||||| Sbjct 178892 CTTTTGGTCTACATGAGATTTCTGTCCTCATTGAGCTTGCCTTAGGACATCTGCGTTATC 178833 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||| ||||||||| ||||||||||| ||| | ||||| || || |||| Sbjct 178832 TTTTAACAGATGTACCGCCCCAGTCAAACTCCCCATCTGGCTATGTCTTCCGCCTAGATC 178773 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||| ||| |||||| | | || | | ||| | ||| | | | || Sbjct 178772 GGCA----AAG--CCTTAAGTCAAAAACA----CCCAAAAGCGAATTTCAACATAACGGA 178723 Query 187 TTAAGTaaaaaaaCGATAAGG-GTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 ||||||||| || || || |||||||||||||||| ||||||| |||||||||| Sbjct 178722 ATAAGTAAAACGAC-ATCGGGAGTAGTGGTATTTCACTGTCGCCGAA---GCTCCCACTT 178667 Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 || ||||||||| | || |||||||||||| ||||||||||| ||||||||||||||||| Sbjct 178666 ATGCTACACCTCCCGAGCCATTTCACAAAGCCGGACTAGAGTGAAGCTCAACAGGGTCTT 178607 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct 178606 CTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGAT 178547 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 178546 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 178487 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 178486 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 178427 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 178426 ATCACATTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 178381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197710720