Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650105.1_202016-05-23] 140 sequences; 6,878,190 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq109 526 7e-147 >seq109 Length=191926 Score = 526 bits (582), Expect = 7e-147 Identities = 423/500 (85%), Gaps = 18/500 (4%) Strand=Plus/Minus Query 5 TCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCC 64 |||||||||||||||||| || ||||||||| ||||| ||||||||||||||| Sbjct 174210 TCATTCCAATTACAAGACTTTAA---GCCCTGTATTGTTATTTCTTGTCACTACCTCCCT 174154 Query 65 GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 124 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 174153 GTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTCTC 174094 Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCC 184 ||||||||||||||||||||||||| |||||||||| |||||| | || |||||||| Sbjct 174093 AGGCTCCCTCTCCGGAATCGAACCCCAATTCCCCGTCACCCGTCGTCGCCCCGGTAGGCC 174034 Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAG 244 | || |||||| || |||| ||||||| |||||| |||||||| ||||||||| ||| Sbjct 174033 AATACCCTACCGTCCAAAGCTGATAGGTCAGAAACTTGAATGATACATCGCCGG--CAAA 173976 Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTT 304 ||||||||||||| ||| ||||||||||||||| | | |||||||| ||||| || Sbjct 173975 GCCATGCGATTCGCTAATTTATTATGAATCACCGATTA--CCCGAAGG--GTTGG-TTAA 173921 Query 305 TATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATT 364 |||||||| || || |||| | | | | ||||||||||||| |||||||| Sbjct 173920 AGTCTAATAA----ACGCCACGCGAAAAC-GCGCCTCGAGCATGTATTAGCCCTAGAATT 173866 Query 365 ACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 424 |||||||||||||||||| || | || ||||||||||| ||||||| |||||||||||| Sbjct 173865 ACCACGGTTATCCATGTA-AAACGAAC-ATCAAATAAACTATAACTGTTTTAATGAGCCA 173808 Query 425 TTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 484 ||||||||||| ||||||| | ||||||||| |||||||||||||||||||||| |||| Sbjct 173807 TTCGCAGTTTCGCTGTATA-AAAGCTTATACTAAGACATGCATGGCTTAATCTTTAAGAC 173749 Query 485 AAGCATATGACTACTGGCAG 504 |||||||||||||||||||| Sbjct 173748 AAGCATATGACTACTGGCAG 173729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510397885440