Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650135.1_202016-05-23] 131 sequences; 6,438,007 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq111 271 1e-70 seq66 271 1e-70 >seq111 Length=22536 Score = 271 bits (300), Expect = 1e-70 Identities = 201/231 (87%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||| | |||||| |||||||||||| ||||||| ||| | Sbjct 5930 GTACAAAGGGCAGGGACGTAGTCGGCACGAGCT-GATGACTCGCGCCTACTAGGCATT-C 5873 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| |||| || ||||||||| ||||||||||||||||||| | | ||||||| Sbjct 5872 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCATACTGTAAGATTA 5813 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||||||| | ||||||||| | | ||||||||||| |||||||||||||||||||| | Sbjct 5812 CCCGGACCCGACGGCCAAGG--AAAAACTCGTTGAATGCATCAGTGTAGCGCGCGTGCAG 5755 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||| ||||||||||||||||||||||||||||||||| | |||||| || Sbjct 5754 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTTACACTTCCTTG 5704 >seq66 Length=37938 Score = 271 bits (300), Expect = 1e-70 Identities = 201/231 (87%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||| | |||||| |||||||||||| ||||||| ||| | Sbjct 16607 GTACAAAGGGCAGGGACGTAGTCGGCACGAGCT-GATGACTCGCGCCTACTAGGCATT-C 16664 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| |||| || ||||||||| ||||||||||||||||||| | | ||||||| Sbjct 16665 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCATACTGTAAGATTA 16724 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||||||| | ||||||||| | | ||||||||||| |||||||||||||||||||| | Sbjct 16725 CCCGGACCCGACGGCCAAGG--AAAAACTCGTTGAATGCATCAGTGTAGCGCGCGTGCAG 16782 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||| ||||||||||||||||||||||||||||||||| | |||||| || Sbjct 16783 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTTACACTTCCTTG 16833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999045665