Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650135.1_202016-05-23] 131 sequences; 6,438,007 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq111 224 2e-56 seq66 224 2e-56 >seq111 Length=22536 Score = 224 bits (248), Expect = 2e-56 Identities = 206/254 (81%), Gaps = 6/254 (2%) Strand=Plus/Plus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACAT 124 |||||| |||||||||| |||| ||||||||| || ||||| || || | |||||| Sbjct 5028 CCAGGA--TTTACTTTGAGAAAACTAGAGTGTTTCAAACAGGCATTCGCCTTGAATACTA 5085 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||| | |||||| | |||||||||||||||||| | | | | || Sbjct 5086 CAGCATGGAATAATGAAGTAGGACTTT-GGTTCTATTTTGTTGGTTATTGAGCCAGA-GT 5143 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 |||| |||||||| ||| ||||| | ||||| || ||||||||||||||||||| | Sbjct 5144 AATGGTTAATAGGAGCAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAG 5203 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 |||| || ||||| ||||||||||||||| || |||||||||||||||||||||| || Sbjct 5204 ATTTGTTAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGA 5262 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 5263 ACGAAAGTTAGGGG 5276 >seq66 Length=37938 Score = 224 bits (248), Expect = 2e-56 Identities = 206/254 (81%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACAT 124 |||||| |||||||||| |||| ||||||||| || ||||| || || | |||||| Sbjct 17509 CCAGGA--TTTACTTTGAGAAAACTAGAGTGTTTCAAACAGGCATTCGCCTTGAATACTA 17452 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||| | |||||| | |||||||||||||||||| | | | | || Sbjct 17451 CAGCATGGAATAATGAAGTAGGACTTT-GGTTCTATTTTGTTGGTTATTGAGCCAGA-GT 17394 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 |||| |||||||| ||| ||||| | ||||| || ||||||||||||||||||| | Sbjct 17393 AATGGTTAATAGGAGCAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAG 17334 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 |||| || ||||| ||||||||||||||| || |||||||||||||||||||||| || Sbjct 17333 ATTTGTTAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGA 17275 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 17274 ACGAAAGTTAGGGG 17261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198801088