Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650135.1_202016-05-23] 131 sequences; 6,438,007 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq111 284 2e-74 seq66 284 2e-74 >seq111 Length=22536 Score = 284 bits (314), Expect = 2e-74 Identities = 226/267 (85%), Gaps = 11/267 (4%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 5788 ACTCGTTGAATGCATCAGTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGA 5729 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTG---GAAGCCAATAGTCCCTCTAAGAAGCCA 118 ||||||||||||| | |||||| | | | ||| ||| |||||||||||||||| | Sbjct 5728 CCTGTTATTGCCTTACACTTCCTTGCGTTTTATGAACGCAA-AGTCCCTCTAAGAAGCGA 5670 Query 119 GCCACCAAC--CATAG----TCGATGGGGCTA-TTTAGCAGGTTAAGGTCTCGTTCGTTA 171 | ||| || || || | ||| ||||||||||||||||||||||||||| Sbjct 5669 TACTGGAACAGCAAAGCTTGTCCCAGATCCTAATTTAGCAGGTTAAGGTCTCGTTCGTTA 5610 Query 172 TCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATA 231 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5609 ACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATA 5550 Query 232 GAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||| Sbjct 5549 GAATCAAGAAAGAGCTATCAATCTGTC 5523 >seq66 Length=37938 Score = 284 bits (314), Expect = 2e-74 Identities = 226/267 (85%), Gaps = 11/267 (4%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 16749 ACTCGTTGAATGCATCAGTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGA 16808 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTG---GAAGCCAATAGTCCCTCTAAGAAGCCA 118 ||||||||||||| | |||||| | | | ||| ||| |||||||||||||||| | Sbjct 16809 CCTGTTATTGCCTTACACTTCCTTGCGTTTTATGAACGCAA-AGTCCCTCTAAGAAGCGA 16867 Query 119 GCCACCAAC--CATAG----TCGATGGGGCTA-TTTAGCAGGTTAAGGTCTCGTTCGTTA 171 | ||| || || || | ||| ||||||||||||||||||||||||||| Sbjct 16868 TACTGGAACAGCAAAGCTTGTCCCAGATCCTAATTTAGCAGGTTAAGGTCTCGTTCGTTA 16927 Query 172 TCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATA 231 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16928 ACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATA 16987 Query 232 GAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||| Sbjct 16988 GAATCAAGAAAGAGCTATCAATCTGTC 17014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798988811