Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650135.1_202016-05-23] 131 sequences; 6,438,007 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq111 111 2e-22 seq66 111 2e-22 >seq111 Length=22536 Score = 111 bits (122), Expect = 2e-22 Identities = 140/188 (74%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC-TCGAATACAT 63 |||||| |||||||||| |||| ||||| ||| || ||||| || || | |||||| Sbjct 5028 CCAGGA--TTTACTTTGAGAAAACTAGAGTGTTTCAAACAGGCATTCGCCTTGAATACTA 5085 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 | ||||||||||| | |||||| | ||||||||||||| |||| | | | | | Sbjct 5086 CAGCATGGAATAATGAAGTAGGACTTT-GGTTCTATTTTGTTGGTTATTGAGCCAGA--G 5142 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||| | |||| | ||| ||||| | ||||| || ||||| ||||||||||||| Sbjct 5143 TAATGGTTAATAGGAGCAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTA 5202 Query 184 GATTTATT 191 ||||| || Sbjct 5203 GATTTGTT 5210 >seq66 Length=37938 Score = 111 bits (122), Expect = 2e-22 Identities = 140/188 (74%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC-TCGAATACAT 63 |||||| |||||||||| |||| ||||| ||| || ||||| || || | |||||| Sbjct 17509 CCAGGA--TTTACTTTGAGAAAACTAGAGTGTTTCAAACAGGCATTCGCCTTGAATACTA 17452 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 | ||||||||||| | |||||| | ||||||||||||| |||| | | | | | Sbjct 17451 CAGCATGGAATAATGAAGTAGGACTTT-GGTTCTATTTTGTTGGTTATTGAGCCAGA--G 17395 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||| | |||| | ||| ||||| | ||||| || ||||| ||||||||||||| Sbjct 17394 TAATGGTTAATAGGAGCAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTA 17335 Query 184 GATTTATT 191 ||||| || Sbjct 17334 GATTTGTT 17327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999350240