Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650135.1_202016-05-23] 131 sequences; 6,438,007 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq111 250 5e-64 seq66 250 5e-64 >seq111 Length=22536 Score = 250 bits (276), Expect = 5e-64 Identities = 254/323 (79%), Gaps = 21/323 (7%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAAT----AGCCAGGCCC-GCTTTGGCGGGTCGCCG---- 70 || ||||||||||||||||||||| | | || | |||||| | | || | | Sbjct 5614 GAACGAGACCTTAACCTGCTAAATTAGGATCTGGGACAAGCTTTG-CTGTTC-CAGTATC 5671 Query 71 GCTTCTTAGAGGGACTATCGGCTCA---AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||||||||| | | ||| | | | |||||| | |||||||||||||||| Sbjct 5672 GCTTCTTAGAGGGACTTTGCGTTCATAAAACGCAAGGAAGTGTAAGGCAATAACAGGTCT 5731 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187 ||||||||||||||||| |||||| |||||||||||||||||| | ||||||||| Sbjct 5732 GTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTACACTGATGCATTCAACGAGTTTT 5791 Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG--TCGTGCTGGGGATAGAG 245 || |||||||| |||| |||||||||| | | | || ||||| |||||||||| Sbjct 5792 TC--CTTGGCCGTCGGGTCCGGGTAATCTT---ACAGTATGCATCGTGATGGGGATAGAT 5846 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 |||||||||||| |||| |||||||||||||||||| ||||| ||||||||| || | Sbjct 5847 TATTGCAATTATTAATCTTGAACGAGGAATGCCTAGTAGGCGCGAGTCATCAGCTCGTGC 5906 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 || ||||||||||||||||||| Sbjct 5907 CGACTACGTCCCTGCCCTTTGTA 5929 >seq66 Length=37938 Score = 250 bits (276), Expect = 5e-64 Identities = 254/323 (79%), Gaps = 21/323 (7%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAAT----AGCCAGGCCC-GCTTTGGCGGGTCGCCG---- 70 || ||||||||||||||||||||| | | || | |||||| | | || | | Sbjct 16923 GAACGAGACCTTAACCTGCTAAATTAGGATCTGGGACAAGCTTTG-CTGTTC-CAGTATC 16866 Query 71 GCTTCTTAGAGGGACTATCGGCTCA---AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||||||||| | | ||| | | | |||||| | |||||||||||||||| Sbjct 16865 GCTTCTTAGAGGGACTTTGCGTTCATAAAACGCAAGGAAGTGTAAGGCAATAACAGGTCT 16806 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187 ||||||||||||||||| |||||| |||||||||||||||||| | ||||||||| Sbjct 16805 GTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTACACTGATGCATTCAACGAGTTTT 16746 Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG--TCGTGCTGGGGATAGAG 245 || |||||||| |||| |||||||||| | | | || ||||| |||||||||| Sbjct 16745 TC--CTTGGCCGTCGGGTCCGGGTAATCTT---ACAGTATGCATCGTGATGGGGATAGAT 16691 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 |||||||||||| |||| |||||||||||||||||| ||||| ||||||||| || | Sbjct 16690 TATTGCAATTATTAATCTTGAACGAGGAATGCCTAGTAGGCGCGAGTCATCAGCTCGTGC 16631 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 || ||||||||||||||||||| Sbjct 16630 CGACTACGTCCCTGCCCTTTGTA 16608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947198759168