Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650135.1_202016-05-23] 131 sequences; 6,438,007 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq111 598 1e-168 seq66 598 1e-168 >seq111 Length=22536 Score = 598 bits (662), Expect = 1e-168 Identities = 451/526 (86%), Gaps = 15/526 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||| ||| |||| |||||||||| ||||||||| Sbjct 9502 CTTTTGGTCTACATGAGATTTCTGTCCTCATTGAGCTTGCCTTAGGACATCTGCGTTATC 9443 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||| ||||||||| ||||||||||| ||| | ||||| || || |||| Sbjct 9442 TTTTAACAGATGTACCGCCCCAGTCAAACTCCCCATCTGGCTATGTCTTCCGCCTAGATC 9383 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||| ||| |||||| | | || | | ||| | ||| | | | || Sbjct 9382 GGCA----AAG--CCTTAAGTCAAAAACA----CCCAAAAGCGAATTTCAACATAACGGA 9333 Query 187 TTAAGTaaaaaaaCGATAAGG-GTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 ||||||||| || || || |||||||||||||||| ||||||| |||||||||| Sbjct 9332 ATAAGTAAAACGAC-ATCGGGAGTAGTGGTATTTCACTGTCGCCGAA---GCTCCCACTT 9277 Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 || ||||||||| | || |||||||||||| ||||||||||| ||||||||||||||||| Sbjct 9276 ATGCTACACCTCCCGAGCCATTTCACAAAGCCGGACTAGAGTGAAGCTCAACAGGGTCTT 9217 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct 9216 CTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGAT 9157 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9156 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 9097 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9096 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 9037 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 9036 ATCACATTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 8991 >seq66 Length=37938 Score = 598 bits (662), Expect = 1e-168 Identities = 451/526 (86%), Gaps = 15/526 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||| ||| |||| |||||||||| ||||||||| Sbjct 13035 CTTTTGGTCTACATGAGATTTCTGTCCTCATTGAGCTTGCCTTAGGACATCTGCGTTATC 13094 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||| ||||||||| ||||||||||| ||| | ||||| || || |||| Sbjct 13095 TTTTAACAGATGTACCGCCCCAGTCAAACTCCCCATCTGGCTATGTCTTCCGCCTAGATC 13154 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||| ||| |||||| | | || | | ||| | ||| | | | || Sbjct 13155 GGCA----AAG--CCTTAAGTCAAAAACA----CCCAAAAGCGAATTTCAACATAACGGA 13204 Query 187 TTAAGTaaaaaaaCGATAAGG-GTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 ||||||||| || || || |||||||||||||||| ||||||| |||||||||| Sbjct 13205 ATAAGTAAAACGAC-ATCGGGAGTAGTGGTATTTCACTGTCGCCGAA---GCTCCCACTT 13260 Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 || ||||||||| | || |||||||||||| ||||||||||| ||||||||||||||||| Sbjct 13261 ATGCTACACCTCCCGAGCCATTTCACAAAGCCGGACTAGAGTGAAGCTCAACAGGGTCTT 13320 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct 13321 CTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGAT 13380 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13381 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 13440 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13441 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 13500 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 13501 ATCACATTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 13546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197857888