Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650135.1_202016-05-23] 131 sequences; 6,438,007 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq111 526 7e-147 seq66 526 7e-147 >seq111 Length=22536 Score = 526 bits (582), Expect = 7e-147 Identities = 423/500 (85%), Gaps = 18/500 (4%) Strand=Plus/Minus Query 5 TCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCC 64 |||||||||||||||||| || ||||||||| ||||| ||||||||||||||| Sbjct 4821 TCATTCCAATTACAAGACTTTAA---GCCCTGTATTGTTATTTCTTGTCACTACCTCCCT 4765 Query 65 GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 124 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 4764 GTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTCTC 4705 Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCC 184 ||||||||||||||||||||||||| |||||||||| |||||| | || |||||||| Sbjct 4704 AGGCTCCCTCTCCGGAATCGAACCCCAATTCCCCGTCACCCGTCGTCGCCCCGGTAGGCC 4645 Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAG 244 | || |||||| || |||| ||||||| |||||| |||||||| ||||||||| ||| Sbjct 4644 AATACCCTACCGTCCAAAGCTGATAGGTCAGAAACTTGAATGATACATCGCCGG--CAAA 4587 Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTT 304 ||||||||||||| ||| ||||||||||||||| | | |||||||| ||||| || Sbjct 4586 GCCATGCGATTCGCTAATTTATTATGAATCACCGATTA--CCCGAAGG--GTTGG-TTAA 4532 Query 305 TATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATT 364 |||||||| || || |||| | | | | ||||||||||||| |||||||| Sbjct 4531 AGTCTAATAA----ACGCCACGCGAAAAC-GCGCCTCGAGCATGTATTAGCCCTAGAATT 4477 Query 365 ACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 424 |||||||||||||||||| || | || ||||||||||| ||||||| |||||||||||| Sbjct 4476 ACCACGGTTATCCATGTA-AAACGAAC-ATCAAATAAACTATAACTGTTTTAATGAGCCA 4419 Query 425 TTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 484 ||||||||||| ||||||| | ||||||||| |||||||||||||||||||||| |||| Sbjct 4418 TTCGCAGTTTCGCTGTATA-AAAGCTTATACTAAGACATGCATGGCTTAATCTTTAAGAC 4360 Query 485 AAGCATATGACTACTGGCAG 504 |||||||||||||||||||| Sbjct 4359 AAGCATATGACTACTGGCAG 4340 >seq66 Length=37938 Score = 526 bits (582), Expect = 7e-147 Identities = 423/500 (85%), Gaps = 18/500 (4%) Strand=Plus/Plus Query 5 TCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCC 64 |||||||||||||||||| || ||||||||| ||||| ||||||||||||||| Sbjct 17716 TCATTCCAATTACAAGACTTTAA---GCCCTGTATTGTTATTTCTTGTCACTACCTCCCT 17772 Query 65 GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 124 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 17773 GTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTCTC 17832 Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCC 184 ||||||||||||||||||||||||| |||||||||| |||||| | || |||||||| Sbjct 17833 AGGCTCCCTCTCCGGAATCGAACCCCAATTCCCCGTCACCCGTCGTCGCCCCGGTAGGCC 17892 Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAG 244 | || |||||| || |||| ||||||| |||||| |||||||| ||||||||| ||| Sbjct 17893 AATACCCTACCGTCCAAAGCTGATAGGTCAGAAACTTGAATGATACATCGCCGG--CAAA 17950 Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTT 304 ||||||||||||| ||| ||||||||||||||| | | |||||||| ||||| || Sbjct 17951 GCCATGCGATTCGCTAATTTATTATGAATCACCGATTA--CCCGAAGG--GTTGG-TTAA 18005 Query 305 TATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATT 364 |||||||| || || |||| | | | | ||||||||||||| |||||||| Sbjct 18006 AGTCTAATAA----ACGCCACGCGAAAAC-GCGCCTCGAGCATGTATTAGCCCTAGAATT 18060 Query 365 ACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 424 |||||||||||||||||| || | || ||||||||||| ||||||| |||||||||||| Sbjct 18061 ACCACGGTTATCCATGTA-AAACGAAC-ATCAAATAAACTATAACTGTTTTAATGAGCCA 18118 Query 425 TTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 484 ||||||||||| ||||||| | ||||||||| |||||||||||||||||||||| |||| Sbjct 18119 TTCGCAGTTTCGCTGTATA-AAAGCTTATACTAAGACATGCATGGCTTAATCTTTAAGAC 18177 Query 485 AAGCATATGACTACTGGCAG 504 |||||||||||||||||||| Sbjct 18178 AAGCATATGACTACTGGCAG 18197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510398021376