Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq121 125 4e-27 seq47 125 4e-27 >seq121 Length=201801 Score = 125 bits (138), Expect = 4e-27 Identities = 101/121 (83%), Gaps = 7/121 (6%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTC----AAAATGATAACATC 56 ||||||||||||||||||||||| ||||||| || ||||| ||| ||| || || Sbjct 17141 GAACCCAAAGACTTTGATTTCTCTCAAGGTGCTGAAGGAGTCGTTTAAACTGACGACCTC 17200 Query 57 GCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 | ||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 17201 ---CAATCTCTAGTCGGCATAGTTTATGGTTAGGACTACGACGGTATCTGATCGTCTTCG 17257 Query 117 A 117 | Sbjct 17258 A 17258 >seq47 Length=37917 Score = 125 bits (138), Expect = 4e-27 Identities = 101/121 (83%), Gaps = 7/121 (6%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTC----AAAATGATAACATC 56 ||||||||||||||||||||||| ||||||| || ||||| ||| ||| || || Sbjct 17141 GAACCCAAAGACTTTGATTTCTCTCAAGGTGCTGAAGGAGTCGTTTAAACTGACGACCTC 17200 Query 57 GCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 | ||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 17201 ---CAATCTCTAGTCGGCATAGTTTATGGTTAGGACTACGACGGTATCTGATCGTCTTCG 17257 Query 117 A 117 | Sbjct 17258 A 17258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399658090