Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq121 284 2e-74 seq47 284 2e-74 >seq121 Length=201801 Score = 284 bits (314), Expect = 2e-74 Identities = 226/267 (85%), Gaps = 11/267 (4%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 16748 ACTCGTTGAATGCATCAGTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGA 16807 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTG---GAAGCCAATAGTCCCTCTAAGAAGCCA 118 ||||||||||||| | |||||| | | | ||| ||| |||||||||||||||| | Sbjct 16808 CCTGTTATTGCCTTACACTTCCTTGCGTTTTATGAACGCAA-AGTCCCTCTAAGAAGCGA 16866 Query 119 GCCACCAAC--CATAG----TCGATGGGGCTA-TTTAGCAGGTTAAGGTCTCGTTCGTTA 171 | ||| || || || | ||| ||||||||||||||||||||||||||| Sbjct 16867 TACTGGAACAGCAAAGCTTGTCCCAGATCCTAATTTAGCAGGTTAAGGTCTCGTTCGTTA 16926 Query 172 TCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATA 231 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16927 ACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATA 16986 Query 232 GAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||| Sbjct 16987 GAATCAAGAAAGAGCTATCAATCTGTC 17013 >seq47 Length=37917 Score = 284 bits (314), Expect = 2e-74 Identities = 226/267 (85%), Gaps = 11/267 (4%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 16748 ACTCGTTGAATGCATCAGTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGA 16807 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTG---GAAGCCAATAGTCCCTCTAAGAAGCCA 118 ||||||||||||| | |||||| | | | ||| ||| |||||||||||||||| | Sbjct 16808 CCTGTTATTGCCTTACACTTCCTTGCGTTTTATGAACGCAA-AGTCCCTCTAAGAAGCGA 16866 Query 119 GCCACCAAC--CATAG----TCGATGGGGCTA-TTTAGCAGGTTAAGGTCTCGTTCGTTA 171 | ||| || || || | ||| ||||||||||||||||||||||||||| Sbjct 16867 TACTGGAACAGCAAAGCTTGTCCCAGATCCTAATTTAGCAGGTTAAGGTCTCGTTCGTTA 16926 Query 172 TCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATA 231 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16927 ACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATA 16986 Query 232 GAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||| Sbjct 16987 GAATCAAGAAAGAGCTATCAATCTGTC 17013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798988811