Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq121 367 2e-99 seq47 367 2e-99 >seq121 Length=201801 Score = 367 bits (406), Expect = 2e-99 Identities = 257/293 (88%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| | ||||| | | ||| | ||||||||||||||||||||||||||||||| Sbjct 12707 TACTAAGTTGGATTACTGTCGCAGCGTCAGTCATCAGTAGGGTAAAACTAACCTGTCTCA 12766 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||| ||||||||||||| || ||| || Sbjct 12767 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGCGGGTGAACAATCCGACACTTTGAGA 12826 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12827 CATCTGCATCTCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 12886 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 12887 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTG 12946 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||||||| | ||||||||||||||||||| |||||| |||||||||| Sbjct 12947 TAAATTTCACAGTTCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 12999 >seq47 Length=37917 Score = 367 bits (406), Expect = 2e-99 Identities = 257/293 (88%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| | ||||| | | ||| | ||||||||||||||||||||||||||||||| Sbjct 12707 TACTAAGTTGGATTACTGTCGCAGCGTCAGTCATCAGTAGGGTAAAACTAACCTGTCTCA 12766 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||| ||||||||||||| || ||| || Sbjct 12767 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGCGGGTGAACAATCCGACACTTTGAGA 12826 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12827 CATCTGCATCTCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 12886 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 12887 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTG 12946 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||||||| | ||||||||||||||||||| |||||| |||||||||| Sbjct 12947 TAAATTTCACAGTTCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 12999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854398880736