Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq121 598 1e-168 seq47 598 1e-168 >seq121 Length=201801 Score = 598 bits (662), Expect = 1e-168 Identities = 451/526 (86%), Gaps = 15/526 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||| ||| |||| |||||||||| ||||||||| Sbjct 13033 CTTTTGGTCTACATGAGATTTCTGTCCTCATTGAGCTTGCCTTAGGACATCTGCGTTATC 13092 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||| ||||||||| ||||||||||| ||| | ||||| || || |||| Sbjct 13093 TTTTAACAGATGTACCGCCCCAGTCAAACTCCCCATCTGGCTATGTCTTCCGCCTAGATC 13152 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||| ||| |||||| | | || | | ||| | ||| | | | || Sbjct 13153 GGCA----AAG--CCTTAAGTCAAAAACA----CCCAAAAGCGAATTTCAACATAACGGA 13202 Query 187 TTAAGTaaaaaaaCGATAAGG-GTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 ||||||||| || || || |||||||||||||||| ||||||| |||||||||| Sbjct 13203 ATAAGTAAAACGAC-ATCGGGAGTAGTGGTATTTCACTGTCGCCGAA---GCTCCCACTT 13258 Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 || ||||||||| | || |||||||||||| ||||||||||| ||||||||||||||||| Sbjct 13259 ATGCTACACCTCCCGAGCCATTTCACAAAGCCGGACTAGAGTGAAGCTCAACAGGGTCTT 13318 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct 13319 CTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGAT 13378 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13379 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 13438 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13439 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 13498 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 13499 ATCACATTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 13544 >seq47 Length=37917 Score = 598 bits (662), Expect = 1e-168 Identities = 451/526 (86%), Gaps = 15/526 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||| ||| |||| |||||||||| ||||||||| Sbjct 13033 CTTTTGGTCTACATGAGATTTCTGTCCTCATTGAGCTTGCCTTAGGACATCTGCGTTATC 13092 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||| ||||||||| ||||||||||| ||| | ||||| || || |||| Sbjct 13093 TTTTAACAGATGTACCGCCCCAGTCAAACTCCCCATCTGGCTATGTCTTCCGCCTAGATC 13152 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||| ||| |||||| | | || | | ||| | ||| | | | || Sbjct 13153 GGCA----AAG--CCTTAAGTCAAAAACA----CCCAAAAGCGAATTTCAACATAACGGA 13202 Query 187 TTAAGTaaaaaaaCGATAAGG-GTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 ||||||||| || || || |||||||||||||||| ||||||| |||||||||| Sbjct 13203 ATAAGTAAAACGAC-ATCGGGAGTAGTGGTATTTCACTGTCGCCGAA---GCTCCCACTT 13258 Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 || ||||||||| | || |||||||||||| ||||||||||| ||||||||||||||||| Sbjct 13259 ATGCTACACCTCCCGAGCCATTTCACAAAGCCGGACTAGAGTGAAGCTCAACAGGGTCTT 13318 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct 13319 CTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGAT 13378 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13379 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 13438 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13439 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 13498 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 13499 ATCACATTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 13544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197857888