Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq121 120 5e-25 seq47 120 5e-25 >seq121 Length=201801 Score = 120 bits (132), Expect = 5e-25 Identities = 99/118 (84%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| ||||||||| ||||||| ||| || ||| Sbjct 12709 GTACGAGAGGAACAGTTGG-TTCAGA-TAATTGGTTAATGCGGCTAGTTGAAAAGCTAGT 12652 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||| |||| |||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 12651 GCCGCGACGCTATCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 12594 >seq47 Length=37917 Score = 120 bits (132), Expect = 5e-25 Identities = 99/118 (84%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| ||||||||| ||||||| ||| || ||| Sbjct 12709 GTACGAGAGGAACAGTTGG-TTCAGA-TAATTGGTTAATGCGGCTAGTTGAAAAGCTAGT 12652 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||| |||| |||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 12651 GCCGCGACGCTATCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 12594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198960384