Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650145.1_202016-05-23] 131 sequences; 6,361,046 total letters Query= NC_011344.1 Length=47342 Score E Sequences producing significant alignments: (Bits) Value seq11 95.1 4e-15 >seq11 Length=2611 Score = 95.1 bits (104), Expect = 4e-15 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 34378 ATTTGGCAAAGGTTTGGGAGCTACACAGGTGGACTTAACTTTAATGGCGGTCGTCACTAT 34437 |||||||| | || || | |||||| |||||| | ||||| || ||| |||||| Sbjct 1724 ATTTGGCAGAAATTCGGTAACTACACTGGTGGATTAGGATTTAACGGTGGTAAACACTAT 1665 Query 34438 GGTATCGACTTTCAAATGCCTACTGGAACGAACATTTATGCTGTTAAAGGCGGTATAGCT 34497 ||| | |||||| ||| | || || ||| || | |||||| || |||| || Sbjct 1664 GGTGTGGACTTTGGCATGATGCCAGGTACAAACGTTAAAGCTGTTGCTGGAGGTAAAGTA 1605 Query 34498 GATAAAGTATGGACTGATTACGGTGGCGGTAATTCTATACAAATTAAGACCGGTGCTAAC 34557 |||||||||| ||| || || |||||||| ||||| || || | | ||| || Sbjct 1604 TCAAAAGTATGGAATGACTATGGCGGCGGTAAATCTATTGAAGTTGATATAGGTA--AAG 1547 Query 34558 GAATGG--AACTGGTATATGCATTTATCTAAGCAATTAGTAAGACAAGGCCAA 34608 || | |||||||||||||| ||| || |||||||| || |||||||| Sbjct 1546 GATTAACTAACTGGTATATGCACTTAAGCAAACAATTAGTTAGTAAAGGCCAA 1494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151372564520688