Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq69 163 1e-37 >seq69 Length=96881 Score = 163 bits (180), Expect = 1e-37 Identities = 206/280 (74%), Gaps = 16/280 (6%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT--CAAA 465 ||||||||| |||||||||||||||||||| || | |||| |||| ||||||| |||| Sbjct 76787 CCCGTCTTGAAACACGGACCAAGGAGTCTATCACCCATGCAAGTGCCTGGGTGTTTCAAA 76846 Query 466 CCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGA 525 ||| ||||||||||||||| | | | || | | ||| | || ||| Sbjct 76847 CCCTCGCGCGTAATGAAAGTAATTGCATGTATTTTTTCTTT----TGCTCATGCGTCCGG 76902 Query 526 TCCTGATG--TCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGG 583 | | || | |||| |||| |||||| | || | ||||||||||||||| Sbjct 76903 -CGTTTTGCTTTTTCGTCGCGATT-------GAGCATGGTTGGTAGGACCCGAAAGATGG 76954 Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643 ||||||||||||| |||| ||||| ||| |||| ||| |||||| ||||||| | | Sbjct 76955 TGAACTATGCCTGGGTAGGATGAAGTCAGGCGAAAGCCTGATGGAGGTCCGCAGCGATAC 77014 Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||||||| |||||||| ||||||||||||||| Sbjct 77015 TGACGTGCAAATCGTTCGTCAAACCTGGGTATAGGGGCGA 77054 Score = 127 bits (140), Expect = 9e-27 Identities = 131/169 (78%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAA-TTTCTTCTAAAGCTAAA 98 |||||| | | ||||||| || ||| |||| || |||||| | ||||| ||| ||||| Sbjct 76409 GAGTCGTGCTTTTTGGGATTGAAGCGCTAATTGTGAGGTAGACTTTCTCATAAGACTAAA 76468 Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 |||| | |||||||||||| ||||||| |||| ||||||||||||| ||| || Sbjct 76469 TATTCGTGTGAGACCGATAGCTTACAAGTACCGTGAGGGAAAGATGAAAAGTACTCTGAC 76528 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 ||||| ||| ||||| || |||||||| || ||||||| | ||| ||| Sbjct 76529 AAGAGTGTT-AAAAGTACCTGAAATTGCTGGAAGGGAACCAATTGGAAC 76576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079995388250