Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq141 197 3e-48 >seq141 Length=30803 Score = 197 bits (218), Expect = 3e-48 Identities = 252/346 (73%), Gaps = 12/346 (3%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||||||| | |||| |||||| || | | || |||||| || ||||||||||| Sbjct 5020 ATCTTCACAGACATTATTATTTCATTGAAATTTTCTTTAAGACAGCGCTCAAATCGTTAC 5079 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 |||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 5080 TCCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATG 5139 Query 129 GTTACGGCCGCCGTTT-ACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCC 187 ||| |||||||||| ||| | |||||| | | ||| || || | Sbjct 5140 AATACAGCCGCCGTTTAACTAGAGCTTAAAAAAA-----TACATTATAGTAGCATTTTTT 5194 Query 188 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGA 247 || || | | || || ||||||| ||||| || |||||||| | | | |||||| Sbjct 5195 TTTCACTTACTAGAACTGGGCAGGAGTCAGTTCTTATACATCATAATTAAATTTAGCAAG 5254 Query 248 AACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGACAGG 307 |||||||||||||| |||||||||| ||| ||||| | | | | | | | | | Sbjct 5255 AACCTGTGTTTTTGATAAACAGTCGTTTGAGCCTAGTATAT------TATACTTTAAAAG 5308 Query 308 CACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAA 353 || | || |||||||||||| | |||||||||| |||||||||| Sbjct 5309 CATTCTTTATCCCTAAGTTACAGAATCATTTTGCCTAGTTCCTTAA 5354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062397715840