Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq69 547 2e-153 seq136 116 1e-23 >seq69 Length=96881 Score = 547 bits (606), Expect = 2e-153 Identities = 441/529 (83%), Gaps = 18/529 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || || ||||||||||| ||| |||| | |||| ||||||||||||||| Sbjct 78819 CTTTTGGTCAACGTGAGATTTCTGTCCTCACTGAGCTCGCCTTGGGACACCTGCGTTATC 78760 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||| ||||||||| ||||||||||||||| | ||||| || ||| | || Sbjct 78759 TTTTAACAGATGTACCGCCCCAGTCAAACTCCCCACCTGGCTATGTCTTCCGCCCAGGTC 78700 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTC-ATTG 185 || | |||| || | | || ||| ||||| | | | Sbjct 78699 ATTA----AA--AACTTAGAGCAAAACAACAA------AAG----GTTCCTGTAATACGG 78656 Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC-TCCCACT 244 | |||| || | ||| |||||||||||||||||||| || | | ||| |||||| Sbjct 78655 AATAAGCAAGACAACATCAAGGGTAGTGGTATTTCACTGACGGCACAGAGGCCTCCCACC 78596 Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304 ||| ||||||| |||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct 78595 TATACTACACCCCTCAAGTCGTCTCACAAAGCCGGACTAGAGTGAAGCTCAACAGGGTCT 78536 Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364 |||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||| Sbjct 78535 TCTTTCCCCGCTGATTTGGCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGATGGCAGA 78476 Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 78475 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 78416 Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 78415 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 78356 Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 | ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 78355 CACCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 78307 >seq136 Length=249 Score = 116 bits (128), Expect = 1e-23 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 135 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 194 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||||||| ||||||||||||||| || |||| Sbjct 195 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635196484320