Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq69 444 2e-122 >seq69 Length=96881 Score = 444 bits (492), Expect = 2e-122 Identities = 401/500 (80%), Gaps = 28/500 (6%) Strand=Plus/Minus Query 5 TCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCC 64 |||||||||||||||||| || |||||||||| ||||| ||||||||||||||| Sbjct 74145 TCATTCCAATTACAAGAC----AATAGCCCTGTATTGTTATTTCTTGTCACTACCTCCCT 74090 Query 65 GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 124 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 74089 GTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTCTC 74030 Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCC 184 ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||| Sbjct 74029 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCTGCCTCGGTAGGCC 73970 Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAG 244 | || |||||| || ||| |||| || |||||| ||||||| ||||||||| ||| Sbjct 73969 AATACCCTACCGTC--AAGCTGATGGGTCAGAAACTTGAATGGGCCATCGCCG---CAAA 73915 Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTT 304 ||||||||||| | ||||||||||||||| | | ||| | | || Sbjct 73914 AGCATGCGATTCGCAAGTTTATTATGAATCACCGAAAA-----AAAGAG----GTTTAAA 73864 Query 305 TATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATT 364 | |||||||| | | || || || | | | ||||||||| ||| |||| Sbjct 73863 AAACTAATAAA-----CGCCGCCAAA---AAGGCATCGAACTTGTATTAGCCCTACAATT 73812 Query 365 ACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 424 | |||||||||||||| | || | || |||| |||| ||||||| | |||||||||| Sbjct 73811 AGCACGGTTATCCATGGAAAAAACGAATACCAAAGAAACTATAACTGTTGTAATGAGCCA 73752 Query 425 TTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 484 ||||||||||||| ||| | | |||| ||||||||||||||||||||||||||| |||| Sbjct 73751 TTCGCAGTTTCACCGTAAAAA--GCTTGTACTTAGACATGCATGGCTTAATCTTTAAGAC 73694 Query 485 AAGCATATGACTACTGGCAG 504 |||||||||||||||||||| Sbjct 73693 AAGCATATGACTACTGGCAG 73674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510396752640