Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20sp._20Xinjiang_20[genbank_20GCA_5F002095265.1_202017-04- 18] 215 sequences; 8,447,544 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq37 149 5e-31 >seq37 Length=429747 Score = 149 bits (164), Expect = 5e-31 Identities = 388/582 (67%), Gaps = 10/582 (2%) Strand=Plus/Minus Query 65992 CACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGT 66051 |||| || | || || || | |||||| | |||||||| || | || || |||| || Sbjct 383155 CACATACATAGGCAGCGCTATAGATGCCAAATTGCAGACTGCCACTTCCTCTGGAGAAGT 383096 Query 66052 ATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATT 66111 |||| |||||||| ||||| || | |||||| || | ||||||||| || Sbjct 383095 GTACTGAACAATTTCACAACACAGGTTTGACGATTTTATGGTTCCAAGATTCTGTTGGTT 383036 Query 66112 ACTCTT-GCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGG 66170 || ||| ||||| ||||| ||||| | |||| | || |||| || || | |||| Sbjct 383035 TGATTTAGCG-TTGCAGGCATCTTTGTATAGCATGAATGGGTTGCCTGTTTCGATTTGGC 382977 Query 66171 ACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA---CCTT 66227 | | ||||| ||| |||| | || | || ||| | |||| || Sbjct 382976 TTTGTAATATGGCAAACCATAGAGTCTGGGCTGGTATGGTTT-TAC-GTCCTAGCCCCGC 382919 Query 66228 TGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATG 66287 ||| ||| || | | ||| || ||||| |||||||| || || | |||| | Sbjct 382918 TGC-TTCATATTTTGTGTAAAGTGCCTCGAATTCGTCACCCCAAACATCATATAGACCTC 382860 Query 66288 GACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATA 66347 | || | | ||| ||||| || | ||| ||| | | || || | ||| || | Sbjct 382859 GGCATTCATCTGGGCACATAAGTGTCCAGTCAGCGTTTGCCTCAACTCTCTTCATGAACA 382800 Query 66348 GATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCT-CAATGCCGTGA 66406 ||||||||||||| | || ||||| | ||| | || | ||||| || || |||||| Sbjct 382799 GATCAGGTATCCATAATGCATAGAACAAATCTCTAGCCC-TTGCTTCTTCAGCTCCGTGA 382741 Query 66407 TTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCG 66466 ||||| || | ||| | ||| || | ||| || || ||||||||||||| ||| ||||| Sbjct 382740 TTTTTACGTAGGTCCAAGAAATCCATGATATCAGCGTGCCATGGTTCCAAGTATATGGCA 382681 Query 66467 AACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACA 66526 ||||| ||| | ||||| || |||||||| || || || | || | ||||| | | Sbjct 382680 AACGACCCCTTGCGTTTCCCACCACCTTGATCTACATATCTTGCAGTAGCATTGAAAATA 382621 Query 66527 CGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568 |||||||| ||||| | ||||| ||| || || || ||| Sbjct 382620 CGCAACATAGGTACAATACCGTTGCTTTTACCGTTTGTACCG 382579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566958247600