Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq4610 325 8e-87 seq42531 197 3e-48 seq141111 185 2e-44 >seq4610 Length=4342 Score = 325 bits (360), Expect = 8e-87 Identities = 279/337 (83%), Gaps = 6/337 (2%) Strand=Plus/Plus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG-CCGA 62 ||||| |||||| |||||| |||||||||| || ||||||||||||||||||| ||| Sbjct 2936 CCCGAACAGGGGAGTGAAACAGACCCTGAAACCATACGCCTACAAGCGGTCGGAGTCCGC 2995 Query 63 GTGATT-CGG-TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGC 120 | ||| ||||||||||||||||||||||||||||||||||||| | |||| ||| Sbjct 2996 CAGCCGGCGGATGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTACTT-TCACTAGC 3054 Query 121 GAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-A 179 |||||||||||| ||||| ||| ||||| || ||||||||| |||||||||||| | Sbjct 3055 GAGGTTAAGGGCCTCAGGTCCGG-AGCCGCAGCGAAAGCGAGTCTTAACAGGGCGCTTTA 3113 Query 180 GTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTA 239 ||| |||| ||||||||||||| || |||||||||| | ||||| ||||| | |||| Sbjct 3114 GTTAGTGGTAGTAGACGCGAAACCGTGCGATCTACCCATGGGCAGGCTGAAGCTGTGGTA 3173 Query 240 ACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAG 299 || | | |||||| ||||||| || |||||||||||| || ||||||| | |||||| Sbjct 3174 ACACATAGTGGAGGGCCGAACCCGTTGACGTTGAAAAGTCTTGGGATGACCTGTGGGTAG 3233 Query 300 GGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGTAC 336 |||||||||||||||||| || ||||||||||||||| Sbjct 3234 GGGTGAAAGGCCAATCAAGCTCGGAAATAGCTCGTAC 3270 >seq42531 Length=1504 Score = 197 bits (218), Expect = 3e-48 Identities = 244/331 (74%), Gaps = 7/331 (2%) Strand=Plus/Plus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| |||||||||| ||| |||||||| | ||||||||| Sbjct 1165 CCCGACGAGGGGAGTGAAAGAGACCCTGAAACCGAATGCCTACAATCAGTCGGAGCCC-- 1222 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | ||||||||||| |||||||||||||| | | |||||| ||| | || ||| || Sbjct 1223 -GCAAGGGTGACGGCGTACCTTTTGCATAATGGGTCAGCGAGTTGGTCTT-ACGAGCAAG 1280 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 ||||| | ||| ||| || || ||||||||| || ||||||||| |||| Sbjct 1281 CTTAAGCCGATGAGGTG---TAGGCGCAGCGAAAGCGAGTCTGAACAGGGCGTTCAGTTC 1337 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGC 243 |||| |||| ||||||| |||||||| ||| | ||||| ||||| | |||||| | Sbjct 1338 GTGGGATCAGACCCGAAACCGGGTGATCTAGCCATGGGCAGGCTGAAGGTGGGGTAACAC 1397 Query 244 GTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGT 303 |||||| ||||||| |||||||||| ||||||| | || ||||||| Sbjct 1398 CCACTGGAGGGCCGAACCCACGTTCGTTGAAAAGAACGGGGATGACCTGTGGTTAGGGGT 1457 Query 304 GAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||||||| ||| |||||| || Sbjct 1458 GAAAGGCCAATCAAACCCGGAGATAGCTGGT 1488 >seq141111 Length=1569 Score = 185 bits (204), Expect = 2e-44 Identities = 246/336 (73%), Gaps = 13/336 (4%) Strand=Plus/Plus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGC---C 60 ||||| ||||| |||||| ||| |||||| ||| |||||||| | || ||||| | Sbjct 1226 CCCGATGAGGGGAGTGAAAGAGAGCCTGAAACCGAATGCCTACAATCTGTGGGAGCATCC 1285 Query 61 GAGTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGC 120 | ||| ||||| |||| ||||||| |||||| | | ||||||| | | || ||| Sbjct 1286 TTGAGAT---GTGACCGCGTACCTTTTGTATAATGGGTCAGCGAGTTAATTTT-ACGAGC 1341 Query 121 GAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-- 178 || ||||| || ||| ||| || || ||||||||| ||||| |||||||| Sbjct 1342 AAGCTTAAGCCGTT-AGGTG---TAGGCGTAGCGAAAGCGAGTCTTAATAGGGCGACTTC 1397 Query 179 AGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGT 238 |||| || | ||||| ||||||| |||||||| ||| ||||||| || || | ||| Sbjct 1398 AGTTCGTAGGATTAGACCCGAAACCGGGTGATCTAGCCATGAGCAGGCTGCAGGTGGGGT 1457 Query 239 AACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTA 298 ||| | || ||| ||||||| | |||||||||| | |||||||| | || || Sbjct 1458 AACACCCACTGAAGGGCCGAACCCACTAGCGTTGAAAAGCTACGGGATGACTTGTGGTTA 1517 Query 299 GGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||||||| ||| |||||| || Sbjct 1518 GGGGTGAAAGGCCAATCAAACCCGGAGATAGCTGGT 1553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 971372999680