Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq4610 158 1e-36 seq141111 96.9 3e-18 seq42531 77.0 3e-12 >seq4610 Length=4342 Score = 158 bits (174), Expect = 1e-36 Identities = 140/174 (80%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 || |||||||||||||| | ||||||| |||||||||||||||||||||||||| |||| Sbjct 2447 GGGGGATGCCTAGGCTCCCAGAGGCGAGGAAGGACGTGATAAGCTGCGAAAAGCCGCGGG 2506 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAGA 127 ||| ||||||||||| ||||||| ||| ||||||||||||||||| || ||| || Sbjct 2507 GATCGGCACATACGATATGATCCGCGGATGTCCGAATGGGGCAACCCACCATGTTGAAGG 2566 Query 128 TATATCATAACGCTAG-GCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 || || || | || |||||||| || ||||||||||||||||||| Sbjct 2567 CATGGTATCCCGAGCGATCGGGAGGCGAACCCGGTGAACTGAAACATCTAAGTA 2620 >seq141111 Length=1569 Score = 96.9 bits (106), Expect = 3e-18 Identities = 135/186 (73%), Gaps = 19/186 (10%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 |||| |||||| ||| | | ||||||| |||||||||| | ||||||| |||| ||||| Sbjct 780 GGTGAATGCCTTGGCGCACAGAGGCGATGAAGGACGTGGCACGCTGCGATAAGCCACGGG 839 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGA---TATA---- 120 || ||| || ||||||||| ||| ||||||||||| ||||||| | || Sbjct 840 GAGGGGCGAGCACCCTTTGATCCGTGGATTTCCGAATGGGGAAACCCGACCCTTTAGGGT 899 Query 121 ------TTGGAGATATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATC 174 |||| || ||| |||| || ||| | | |||||| || ||||||||||||| Sbjct 900 CATCCTTTGGTGA-ATA-CATA--GCCAGGGG--AAGCGAACCCGGTGAACTGAAACATC 953 Query 175 TAAGTA 180 | |||| Sbjct 954 TCAGTA 959 >seq42531 Length=1504 Score = 77.0 bits (84), Expect = 3e-12 Identities = 132/183 (72%), Gaps = 13/183 (7%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCG-GAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGG 66 ||||||||||| || | ||| |||||||||||||||||| | |||||| |||| ||| Sbjct 718 GGTGGATGCCTCGG-TGTCGAGAGGCGAAGAAGGACGTGGCACTCTGCGATAAGCCGCGG 776 Query 67 GGATTGGCACATACGA--ATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGG 124 ||| | | | ||| |||||||| ||| ||||||||||| ||||||| || | Sbjct 777 GGAGATG-AGA-GCGATCTTTGATCCGCGGATTTCCGAATGGGGAAACCCGACCCTTTAG 834 Query 125 AGATATATCA----TAACGC-TAGGCGT--TAGGCGAACGTGGGGAACTGAAACATCTAA 177 | || | || | ||| ||| |||||||| ||||||||||||||||| | Sbjct 835 GGTCATCGTACGGTGAATACATAGCCGTGCGAGGCGAACCCGGGGAACTGAAACATCTCA 894 Query 178 GTA 180 ||| Sbjct 895 GTA 897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476122438890