Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq4610 138 1e-30 seq12707 96.9 4e-18 seq61608 95.1 1e-17 seq113736 78.8 1e-12 >seq4610 Length=4342 Score = 138 bits (152), Expect = 1e-30 Identities = 137/175 (78%), Gaps = 3/175 (2%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || |||| |||||| || |||||| || || | |||||||| ||| || ||| ||| | Sbjct 4019 CGTAAACCGACACAGGTGGTCGGGAAGAGAATTCCAAGGCGCTCGAGAGATTCATGGTCA 4078 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141 |||||||||||||| || || |||||||||||| ||||||| | ||| ||| Sbjct 4079 AGGAACTAGGCAAAATGGACCCGTAACTTCGGGA-GAAGGGTCGC--CCCCCTCCGGGGG 4135 Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||||| ||| |||||||||| |||||||| ||||||||||||||| ||| || Sbjct 4136 GGCCGCAGTGAAGAGGTCCAGGCGACTGTTTATCAAAAACACAGGGCTCTGCAAA 4190 >seq12707 Length=528 Score = 96.9 bits (106), Expect = 4e-18 Identities = 130/182 (71%), Gaps = 13/182 (7%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || ||||| |||||||||||| ||| | | | |||| Sbjct 221 AAACCGACACAGGTGGACAGGTAGAGTATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 280 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCC----------TACCCAGA 134 |||| |||||| || ||| |||||||||||| || ||| ||| | |||| Sbjct 281 AACTCGGCAAATTGCCCCCGTAACTTCGGGAGAAGGGGGCCCCATGGTTGGGCAACCAGC 340 Query 135 AATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCC 194 || ||| ||| ||| ||| ||| |||||||| |||||||||||||| ||| Sbjct 341 TGTG---GGGGGCACAGACCAGGGGGTGGCGACTGTTTACTAAAAACACAGGGCTCTGCG 397 Query 195 AA 196 || Sbjct 398 AA 399 >seq61608 Length=535 Score = 95.1 bits (104), Expect = 1e-17 Identities = 130/179 (73%), Gaps = 7/179 (4%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| || | |||| Sbjct 221 AAACCGACACAGGTGGACTGGTAGAGCATACCAAGGCGCTTGAGAGAACTGCGTTGAAGG 280 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCA---GAAAT--GG 139 |||| |||||| || ||| |||||||||||| || ||| ||| || | || || Sbjct 281 AACTCGGCAAATTGCCCCCGTAACTTCGGGAGAAGGGGGCCCCGGCCTTGGGCAACCAGG 340 Query 140 GA--GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | ||| ||| ||| ||| ||| |||||||| |||||||||||||| ||| || Sbjct 341 GTCGGGGGGCACAGACCAGGGGGTGGCGACTGTTTATTAAAAACACAGGGCTCTGCGAA 399 >seq113736 Length=463 Score = 78.8 bits (86), Expect = 1e-12 Identities = 131/182 (72%), Gaps = 12/182 (7%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTT-AA 82 ||||| |||||| || | | ||| || |||| |||||||||||| ||| | | ||| || Sbjct 156 CAAACCGACACAGGTGGACTGGTAGAGCATACCAAGGCGCTTGAGAGAA-CTCTGTTGAA 214 Query 83 GGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACC--CAG--AAATG 138 |||||| |||||| | || |||| |||| || ||||| ||| | ||| || || Sbjct 215 GGAACTCGGCAAATTACTCCCGTAAGTTCGCGA-GAAGGGAGCCTGGCATCAGGCAACTG 273 Query 139 G----GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCC 194 | |||| ||| ||| ||| ||| |||||||| |||||||||||||| ||| Sbjct 274 GTGTCCAGGG-GCACAGACCAGGGGGTGGCGACTGTTTATTAAAAACACAGGGCTCTGCG 332 Query 195 AA 196 || Sbjct 333 AA 334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530445133260