Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq61608 246 8e-63 seq113736 219 1e-54 seq12707 214 5e-53 seq4610 194 4e-47 seq5547 141 2e-31 seq303 138 3e-30 seq9707 134 3e-29 seq109490 127 5e-27 seq82215 113 1e-22 >seq61608 Length=535 Score = 246 bits (272), Expect = 8e-63 Identities = 246/319 (77%), Gaps = 25/319 (8%) Strand=Plus/Minus Query 103 ACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCG 162 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 535 ACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCG 476 Query 163 ATCAAGAGCTTCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCA 222 || ||||||| || ||||| | |||||||||||||||||||||||||||| Sbjct 475 ATTCAGAGCTT-GC--------ACCCCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCA 425 Query 223 CACCCTATACGTCCACTTTCGTG--TTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCA 280 |||||||||||| ||| || | || |||||| ||||||||||||||||||||||| Sbjct 424 GACCCTATACGTCGCCTTGCGCGGCTTCGCAGAGCCCTGTGTTTTTAATAAACAGTCGCC 365 Query 281 GCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCG 340 | |||||| | | | || | | || | |||| | | || Sbjct 364 ACCCCCTGGTCTGTGCCCCCCGACCCTGGTT---GCCCAAGGC-----------CGGGGC 319 Query 341 CACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAG 400 | ||||||||||||||||||| | | |||||| ||||||||| | |||||||||||| Sbjct 318 CCCCTTCTCCCGAAGTTACGGGGGCAATTTGCCGAGTTCCTTCAACGCAGTTCTCTCAAG 259 Query 401 CGCCTTGGTATTCTCTACC 419 ||||||||||| ||||||| Sbjct 258 CGCCTTGGTATGCTCTACC 240 >seq113736 Length=463 Score = 219 bits (242), Expect = 1e-54 Identities = 236/312 (76%), Gaps = 24/312 (8%) Strand=Plus/Minus Query 108 GAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA 167 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct 463 GAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCG 404 Query 168 GAGCTTCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCC 227 ||||| || ||||| | |||||||||||||||||||||||||||| |||| Sbjct 403 GAGCT---------CTCACCCCTCCTTTTAACCTTCCGGCACCGGGCAGGCGTCAGACCC 353 Query 228 TATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCT 287 |||||||| ||| || || |||||| ||||||||||||||||||||||| | ||| Sbjct 352 TATACGTCGTCTTGCGACTTCGCAGAGCCCTGTGTTTTTAATAAACAGTCGCCACCCCCT 293 Query 288 GGTATCTTCGACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTC 347 ||| | | | | || || | || | | | | | | ||| | ||||| Sbjct 292 GGTCTGTGCCCCTGG---------AC--ACCAGTTGCCTGA---TGCCAGGCTC-CCTTC 248 Query 348 TCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTG 407 || |||| |||||| |||||| ||||||||| | |||||||||||||||||||| Sbjct 247 TCGCGAACTTACGGGAGTAATTTGCCGAGTTCCTTCAACAGAGTTCTCTCAAGCGCCTTG 188 Query 408 GTATTCTCTACC 419 |||| ||||||| Sbjct 187 GTATGCTCTACC 176 >seq12707 Length=528 Score = 214 bits (236), Expect = 5e-53 Identities = 235/312 (75%), Gaps = 23/312 (7%) Strand=Plus/Minus Query 108 GAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA 167 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct 528 GAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCG 469 Query 168 GAGCTTCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCC 227 |||| || ||| | | |||||||||||||||||||||||||||| |||| Sbjct 468 CAGCT---------CTCACCGCTCCTTTTAACCTTCCGGCACCGGGCAGGCGTCAGACCC 418 Query 228 TATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCT 287 |||||||| ||| || || |||||| ||||||||||| ||||||||||| | ||| Sbjct 417 TATACGTCGCCTTGCGGCTTCGCAGAGCCCTGTGTTTTTAGTAAACAGTCGCCACCCCCT 358 Query 288 GGTATCTTCGACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTC 347 || ||| | || || |||| || | | | || || | ||||| Sbjct 357 GG--TCTGTGCCCCCCA-CAGCT---GG--------TTGCCCAACCATGGGGCCCCCTTC 312 Query 348 TCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTG 407 |||||||||||||| | | |||||| ||||||||| | |||||||||||||||||| Sbjct 311 TCCCGAAGTTACGGGGGCAATTTGCCGAGTTCCTTCAGCATCGTTCTCTCAAGCGCCTTG 252 Query 408 GTATTCTCTACC 419 |||| ||||||| Sbjct 251 GTATACTCTACC 240 >seq4610 Length=4342 Score = 194 bits (214), Expect = 4e-47 Identities = 240/333 (72%), Gaps = 33/333 (10%) Strand=Plus/Minus Query 103 ACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCG 162 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 4342 ACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCG 4283 Query 163 ATCAAGAGCTTCGCGT-----TAGC----TAACCCCATCAATTAACCTTCCGGCACCGGG 213 | | ||||| | | || | || | | ||||||||||||||||||| Sbjct 4282 GTTCAACGCTTCCCCCGCCAATGGCGGGTTCACGTCTCCCCTTAACCTTCCGGCACCGGG 4223 Query 214 CAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAAC 273 |||| |||| ||||||||||| || ||| ||||||||| |||||||||| |||||| Sbjct 4222 CAGGTGTCAGGCCCTATACGTCATCTCTCGATTTTGCAGAGCCCTGTGTTTTTGATAAAC 4163 Query 274 AGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTC 333 |||||| | ||| | || || || | ||||| Sbjct 4162 AGTCGCCTGGACCTCTTCACTGCGGCC--------CCCCCGGAG---------------- 4127 Query 334 ACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTC 393 |||| ||||||||||||||||||| || |||||||||||||||| || || Sbjct 4126 GGGGGCGACCCTTCTCCCGAAGTTACGGGTCCATTTTGCCTAGTTCCTTGACCATGAATC 4067 Query 394 TCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 |||| |||||||||| ||||||| ||| ||||| Sbjct 4066 TCTCGAGCGCCTTGGAATTCTCTTCCCGACCAC 4034 >seq5547 Length=16686 Score = 141 bits (156), Expect = 2e-31 Identities = 148/190 (78%), Gaps = 11/190 (6%) Strand=Plus/Minus Query 94 ACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACC 153 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 16686 ACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACC 16627 Query 154 GGGGCTTCGATCA-AGAGCTTCGCGTTAGCTAACCCCATCAAT---TAACCTTCCGGCAC 209 ||||||| || | | || | ||| || ||||||| || || ||||| Sbjct 16626 AGGGCTTC-ATAACAAAG---CAAATTA---CACTTCATCAATTTATAGCCGATTGGCAC 16574 Query 210 CGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAAT 269 |||||||||||| | | |||| || ||||| || || ||| |||||||||| || Sbjct 16573 TGGGCAGGCGTCAGCCTCCATACATCATCTTTCAACTTAGCGGAGACCTGTGTTTTTGAT 16514 Query 270 AAACAGTCGC 279 |||||||||| Sbjct 16513 AAACAGTCGC 16504 >seq303 Length=42796 Score = 138 bits (152), Expect = 3e-30 Identities = 111/134 (83%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| | | | ||||||| || | || | ||||||| | ||||| Sbjct 42663 GCATCTTCACAGACACTGCTATTTCACCGACTTTCTCTTTGAGACAGTGTTTAAGTCGTT 42722 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 42723 ACGCCTTTCATGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 42782 Query 133 TTGTTACGGCCGCC 146 | |||||||||||| Sbjct 42783 TAGTTACGGCCGCC 42796 >seq9707 Length=1225 Score = 134 bits (148), Expect = 3e-29 Identities = 109/132 (83%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCG 61 |||| || | |||||||||| | | | ||||||||| ||| ||| ||||||| | Sbjct 134 GCGGGTAACCGGCATCTTCACCGATACTACAATTTCACCGAGATCATGGTCGAGACAGTG 75 Query 62 CCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 121 | |||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 74 TCCAGATCGTTGCACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 15 Query 122 TAGGACCGTTAT 133 |||||||||||| Sbjct 14 TAGGACCGTTAT 3 >seq109490 Length=340 Score = 127 bits (140), Expect = 5e-27 Identities = 94/110 (85%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||| | |||||||||| | || ||||||||| |||||||| | ||||||||| Sbjct 110 CGCGGGTACTCCGCATCTTCACGGAGAGTTCAATTTCGCTGAGTCTGCGTTGGAGACAGT 51 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 110 | | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 50 GGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 1 >seq82215 Length=341 Score = 113 bits (124), Expect = 1e-22 Identities = 91/110 (83%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || | |||||||||| | | ||||||||| ||||||| | ||||||||| Sbjct 110 CGCGGGTAGCCCGCATCTTCACGGGCAATTCAATTTCGCTGAGTCGATGCTGGAGACAGT 51 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 110 | | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 50 GGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1258950532480