Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq4610 419 7e-115 seq72888 300 5e-79 seq105608 237 5e-60 seq303 168 2e-39 seq130150 118 3e-24 seq4648 109 2e-21 >seq4610 Length=4342 Score = 419 bits (464), Expect = 7e-115 Identities = 401/502 (80%), Gaps = 15/502 (3%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1090 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 1149 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCC--TCTGACCCC 118 |||||||||||||| | |||||| ||||||||||| ||| | || | | |||| Sbjct 1150 GTGGTTTAATTCGATGATACGCGAGGAACCTTACCAGGGCTT-AAATGCATTATGACAGG 1208 Query 119 TCTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 || |||||| || ||| |||| ||||| | || ||||| ||||||||||||||| Sbjct 1209 TCCAGAGATGGACTTTT---CTTC---GGACATATTGCAAGGTGCTGCATGGTTGTCGTC 1262 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||| |||||| ||| |||||||||| |||||||||||||| | |||||| Sbjct 1263 AGCTCGTGCCGTGAGGTGTCAGGTTAAGTCCTATAACGAGCGCAACCCCTGCCGTTAGTT 1322 Query 239 GCCATCAT-TA-AGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTG 295 |||| ||| || || |||| ||||||| ||||||||||| ||||||| |||||||||| Sbjct 1323 GCCAGCATGTAGAGATGGGGACTCTAACGGGACTGCCGGTG-CAAACCGCGAGGAAGGTG 1381 Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 |||||||||||||||||||| | |||||| | ||||| |||||||||||||||||| | Sbjct 1382 GGGACGACGTCAAATCATCACGGCCCTTACGTCCTGGGCCACACACGTGCTACAATGGCC 1441 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 |||| ||| ||| | ||| ||| ||| || ||| ||| | || ||||||| Sbjct 1442 GGTACAGCGGGAAGCCACCCCGTAAGGGGGAGCGGAT-CCACAAAACCGGTCACAGTTCG 1500 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CA 474 ||| | ||||||||| |||| |||||||||||||||||||||||| | ||||| || Sbjct 1501 GATCGGGGTCTGCAACCCGACCCCGTGAAGCTGGAATCGCTAGTAATCGGATATCAGCCA 1560 Query 475 TGCTACGGTGAATACGTTCCCG 496 || | ||||||||||||||||| Sbjct 1561 TGATCCGGTGAATACGTTCCCG 1582 >seq72888 Length=316 Score = 300 bits (332), Expect = 5e-79 Identities = 262/327 (80%), Gaps = 24/327 (7%) Strand=Plus/Plus Query 172 TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAG 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGCC 60 Query 232 CTTAGTTGCCATCA--TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGG 289 |||||||||| || || | |||||||||||| ||||||||||| ||||||||||| Sbjct 61 GTTAGTTGCCAGCACGTTTGGGTGGGCACTCTAACGGGACTGCCGGTGTCAAACCGGAGG 120 Query 290 AAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACA 349 |||||||||| |||||||| |||||||| |||||| | ||||||||||||||||||| Sbjct 121 AAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGCGCAGGGCTACACACGTGCTACA 180 Query 350 ATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTC 409 || ||||| || | | || |||| | |||| || |||| Sbjct 181 AT-------------GGCAGTGACAATG--------AGTTAATCTCTAAAAGCTG-TCTC 218 Query 410 AGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGAT 469 |||||| |||| |||||||||||||| |||||| |||||||||||||||||| ||| Sbjct 219 AGTTCGAATTGGGGTCTGCAACTCGACCCCATGAAGTCGGAATCGCTAGTAATCGTGGAT 278 Query 470 CAGCATGCTACGGTGAATACGTTCCCG 496 |||||||| |||||||||||||||||| Sbjct 279 CAGCATGCCACGGTGAATACGTTCCCG 305 >seq105608 Length=359 Score = 237 bits (262), Expect = 5e-60 Identities = 188/220 (85%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 217 TACGGCCGCAAGGTTAAAACTCAAAGAAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 158 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 ||||||||||||||||||||||||||||||||||| |||||||||| || | | | Sbjct 157 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCTGCGCTTGACATCC-CT-ATCGCGG 100 Query 121 TAGAGATAGAGGTTTCCCCT----TCGG-GGGACAGAGTGACAGGTGATGCATGGTTGTC 175 ||| ||| ||| || | |||| ||| || |||||||||| ||||||| |||| Sbjct 99 ATTAGAGAGATCTTTTCCTTCAGCTCGGCTGGATAG-GTGACAGGTGCTGCATGGCTGTC 41 Query 176 GTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 |||||||||||||||||||||||||||||||||||||||| Sbjct 40 GTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 1 >seq303 Length=42796 Score = 168 bits (186), Expect = 2e-39 Identities = 261/370 (71%), Gaps = 31/370 (8%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| ||||||| |||||||||||||||||||||||| | || |||||||| ||||||| Sbjct 40631 TACGCTCGCAAGGGTGAAACTCAAAGGAATTGACGGGGGCTCGTACAAGCGGCGGAGCAT 40572 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 ||||||||||| || |||| || || || ||||||| | ||||| | ||| | Sbjct 40571 GTGGTTTAATTTGATGCAAAGCAAAAAATCTTACCAGAGCTTGAAGT----TGAAATTTT 40516 Query 121 TAGAGATAGAGGTTT------CCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGT 174 | | || | || || | || | | | ||||| ||||||| ||| Sbjct 40515 CAAATTTAATCGATTTGAAAAGCCATAAATTGGCAAAAACG--AGGTGGTGCATGGCTGT 40458 Query 175 CGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTT 234 |||||||||||||||||||| |||||||||| |||| |||||||||||||| Sbjct 40457 CGTCAGCTCGTGTCGTGAGACGTTGGGTTAATTCCCTTAACGAGCGCAACCC-------- 40406 Query 235 AGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGT--GACAAACCGGAGGAAG 292 ||| ||| | | || | | | | || | || || | | | | || ||| Sbjct 40405 --TTGTCATAAGTTCTTTTGTC-TTATGAGAAGGCT--CGATTCGTCGA----GATTAAG 40355 Query 293 GTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATG 352 | ||| |||||||| ||||||||||| ||||| | ||||||||||||||||||||||| Sbjct 40354 AGGAGGATGACGTCAAGTCATCATGCCCTTTATGCTCTGGGCTACACACGTGCTACAATG 40295 Query 353 GACAATACAA 362 | | ||||| Sbjct 40294 GTCGTTACAA 40285 >seq130150 Length=200 Score = 118 bits (130), Expect = 3e-24 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 128 TACGGCCGCAAGGTTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 187 Query 61 GTGGTTTAATTCG 73 ||||||||||||| Sbjct 188 GTGGTTTAATTCG 200 >seq4648 Length=200 Score = 109 bits (120), Expect = 2e-21 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 73 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 14 Query 61 GTGGTTTAATTCG 73 ||||||||||||| Sbjct 13 GTGGTTTAATTCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1501793782400