Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq116823 288 2e-75 seq130259 275 1e-71 seq126212 174 3e-41 seq115004 73.4 7e-11 seq9707 73.4 7e-11 seq303 73.4 7e-11 >seq116823 Length=297 Score = 288 bits (318), Expect = 2e-75 Identities = 179/192 (93%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 192 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 133 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 || | ||||||||||||| || ||| || |||||| || ||||||||||||||||| Sbjct 132 TTGGCGGGTGAACAATCCGACACTTTGAGACTTCTGCGTCTCAATGATAGGAAGAGCCGA 73 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 72 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 13 Query 211 CTGTGGTAACTT 222 |||||||||||| Sbjct 12 CTGTGGTAACTT 1 >seq130259 Length=297 Score = 275 bits (304), Expect = 1e-71 Identities = 175/190 (92%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 108 ATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATT 167 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 || ||||||||||||| || ||| || ||||| || |||||| |||||||||||| Sbjct 168 AGCGGGTGAACAATCCGACACTTTGAGACTTCTGTGTCTCAATGATAAGAAGAGCCGACA 227 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 228 TCGAAGGATTAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 287 Query 213 GTGGTAACTT 222 |||||||||| Sbjct 288 GTGGTAACTT 297 >seq126212 Length=338 Score = 174 bits (192), Expect = 3e-41 Identities = 117/131 (89%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 338 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 279 Query 223 TTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCAT 282 ||||| |||||||||| || |||| | ||||||||||||||||||| |||||| Sbjct 278 TTCTGACACCTCTAGCTGAAAGTTTCTCAGACCTAAAGGATCGATAGGCCATGCTTTCAC 219 Query 283 GGTTTGTATTC 293 |||||||||| Sbjct 218 AGTTTGTATTC 208 >seq115004 Length=221 Score = 73.4 bits (80), Expect = 7e-11 Identities = 122/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| |||||||||||||||||| || ||| | || ||||| | ||| Sbjct 203 CTGTCTCACGACGTTCTAAACCCAGCTCACGTACCGCTTTAATTGGCGAACAGCCAAACC 144 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| | || | | | ||| || ||||||||||||| | |||| | Sbjct 143 CTTGGGACC---TGCTCCAGCCCCAGGATGCGATGAGCCGACATCGAGGTGCCAAACAAT 87 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| |||| || ||||| || |||| |||||||| | ||| ||||| Sbjct 86 GCCGTCGATATGGACTCTTGGGCATCATCAGCCTGTTATCCCCGGCGTACCTTTT 32 >seq9707 Length=1225 Score = 73.4 bits (80), Expect = 7e-11 Identities = 122/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| ||||| Sbjct 682 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACC 623 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| |||| | | | ||| || ||||||||||||| | |||| | Sbjct 622 CTTGGGACC---TTCTCCAGCCCCAGGATGTGACGAGCCGACATCGAGGTGCCAAACCCC 566 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| | ||| | ||||| | | |||| |||||||| | ||| ||||| Sbjct 565 CCCGTCGATGTGAGCTCTTGGGGGAGATCAGCCTGTTATCCCCGGCGTACCTTTT 511 >seq303 Length=42796 Score = 73.4 bits (80), Expect = 7e-11 Identities = 122/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||||||| || || |||| ||||| ||||| Sbjct 42126 CTGTCTCACGACGTTCTGAACCCAGCTCACGTGCCGCTTTCATGGGCGAACAGACCAACC 42185 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| | | | || | | ||| || ||||||||||||| | |||| | Sbjct 42186 CTTGGGACCTACTACCGCCCC---AGGATGCGACGAGCCGACATCGAGGTGCCAAACCTC 42242 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| || | || || || | | |||| ||||||||| ||||||||| Sbjct 42243 CTCGTCGATAGGGACTCTAGGAGGAGATTAGCCTGTTATCCCTAGAGTAACTTTT 42297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853146680640