Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq9707 192 1e-46 seq80947 170 4e-40 seq104763 152 1e-34 seq303 114 3e-23 >seq9707 Length=1225 Score = 192 bits (212), Expect = 1e-46 Identities = 180/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 ||||||||| | ||| ||||||||||||| |||||||||| |||| ||||||||||| Sbjct 301 GGGACAGTGCGTGGTGGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGGGTAACGGAGGC 360 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 |||||| | |||||||| | ||| |||| |||||| ||||||| |||| ||||| | Sbjct 361 TTCCAAAGGTGCCCTCAGCACGCTTGGCAACCGTGCGCAGAGTGCAATGGCACAAGGGCG 420 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 ||||||| || | || | | | |||| |||||||| |||| || |||||||| ||| Sbjct 421 CTTGACTGTGAGGCATACAGGCCGAACAGGTACGAAAGTAGGGCATAGTGATCCGGTGGT 480 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | | |||||| |||| |||||| | ||||||||| ||| | ||||||| Sbjct 481 TCCGCATGGAAGGGCCATCGCTCAAAGGATAAAAGGTACGCCGGGGATA 529 >seq80947 Length=217 Score = 170 bits (188), Expect = 4e-40 Identities = 160/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| ||||||||||||||||||||||||||||||||||||||||||| | ||| || || Sbjct 10 GGGTAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCGCGAAGGTAGGCT 69 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 || ||| ||||| || | ||||||| |||| ||| || ||||||||| | | Sbjct 70 CAAGCTGGTCGGAAATCAGCTGTTGAGTGCAATGGCATAAGCCTGCCTGACTGCGAGAGC 129 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 || || ||||| |||||||||||| | || |||||||| ||| | | ||||| ||| Sbjct 130 GACAGTTCGAGCAGAGACGAAAGTCGGTCATAGTGATCCGGTGGTCCCGCGTGGAAGGGC 189 Query 306 CGTCGCTCGACGGATAAAAGCTAC 329 | |||||| ||||||||||| ||| Sbjct 190 CATCGCTCAACGGATAAAAGGTAC 213 >seq104763 Length=217 Score = 152 bits (168), Expect = 1e-34 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| ||||||||||||||||||||||||||||||||||||||||||| | | | | || Sbjct 208 GGGTAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCGCGATGGTGGGCT 149 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 || || ||| | | | ||||||| |||| ||| | ||||||||| ||| Sbjct 148 CAAGCCGGTCGGACATCGGCTGTTGAGTGCAATGGCATAAGCCCGCCTGACTGCGAGACC 89 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 || ||| ||||| |||||||||||| | || |||||||| ||| | | ||||| ||| Sbjct 88 GACAGGTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCGGTGGTCCCGCGTGGAAGGGC 29 Query 306 CGTCGCTCGACGGATAAAAGCTAC 329 | |||||| ||||||||||| ||| Sbjct 28 CATCGCTCAACGGATAAAAGGTAC 5 >seq303 Length=42796 Score = 114 bits (126), Expect = 3e-23 Identities = 163/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 |||||||| | | | |||||||||||||| ||||||||| ||| |||||||||| | Sbjct 42506 GACAGTGTTAATAAGATAGTTTGACTGGGGCAGTCGCCTCCTAAAAGGTAACGGAGGTGT 42447 Query 173 CCAAAGATACCCTCAGCTTGGAT-GGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 | ||| | ||||| | | | ||||||| | | | || ||||| | ||| | | Sbjct 42446 ACTAAGGTCTTCTCAGAATCGGTCGGAAACCGTTTGTAGAGCATAAAGGTATAAGAGGGC 42387 Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291 | |||| || | || ||||| |||||||| || |||| ||||||||| ||| Sbjct 42386 CTAACTGTGAGATTAGTGTATCGAGCAGAAACGAAAGTTGGTCTTAGTGATCCGGCAGTG 42327 Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || | |||| | | ||||||| ||||||||||| ||| || |||||| Sbjct 42326 CTTAGAGGAAGGCCTGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 42279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980958917440