Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq9707 194 2e-47 seq109490 109 6e-22 seq303 102 9e-20 seq82215 100 3e-19 >seq9707 Length=1225 Score = 194 bits (214), Expect = 2e-47 Identities = 131/151 (87%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| | Sbjct 154 CGGGGTCTTTTCGTCCCACTGCGGGTAACCGGCATCTTCACCGATACTACAATTTCACCG 95 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || ||| ||| ||||||| | |||||||||||||||||||||||||||| Sbjct 94 AGATCATGGTCGAGACAGTGTCCAGATCGTTGCACCATTCGTGCAGGTCGGAACTTACCC 35 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 34 GACAAGGAATTTCGCTACCTTAGGACCGTTA 4 >seq109490 Length=340 Score = 109 bits (120), Expect = 6e-22 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | |||||||| || |||||||||| || | | ||||||| ||| Sbjct 129 CGGGGTCTTTCCGTCTAACCGCGGGTACTCCGCATCTTCACGGAGAGTTCAATTTCGCTG 70 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || || | ||||||| ||| |||||||||||||||||||||||||| Sbjct 69 AGTCTGCGTTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 10 Query 143 GACAAGGAA 151 ||||||||| Sbjct 9 GACAAGGAA 1 >seq303 Length=42796 Score = 102 bits (112), Expect = 9e-20 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 51 TCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNNNNNNN 110 || |||||||||| || ||| | ||||||| || | ||||||||| Sbjct 42660 TCCGCATCTTCACAGACACTGCTATTTCACCGACTTTCTCTTTGAGACAGTGTTTAAGTC 42719 Query 111 NNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 170 ||| || ||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 42720 GTTACGCCTTTCATGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 42779 Query 171 TTA 173 ||| Sbjct 42780 TTA 42782 >seq82215 Length=341 Score = 100 bits (110), Expect = 3e-19 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | |||||||| | |||||||||| | | | ||||||| ||| Sbjct 129 CGGGGTCTTTCCGTCTGACCGCGGGTAGCCCGCATCTTCACGGGCAATTCAATTTCGCTG 70 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || | | | ||||||| ||| |||||||||||||||||||||||||| Sbjct 69 AGTCGATGCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 10 Query 143 GACAAGGAA 151 ||||||||| Sbjct 9 GACAAGGAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546422396310