Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq4610 188 2e-45 seq83951 181 2e-43 seq131744 174 3e-41 seq38801 174 3e-41 seq14957 168 1e-39 seq303 156 9e-36 >seq4610 Length=4342 Score = 188 bits (208), Expect = 2e-45 Identities = 160/193 (83%), Gaps = 3/193 (2%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGA-CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||| | ||| || || |||| | | |||||||||| ||||||||||||| | ||||| Sbjct 640 TTTACGACCCGTAGGGCCGTCTTCC-CGCACGCGGCAT-GGCTGGATCAGGCCTCCGCCC 583 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||| Sbjct 582 ATTGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAG 523 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| |||| |||||||| | || ||||||||||||||| ||| ||||| | Sbjct 522 TGTGGGGGATCCCCCTCTCAGGGCCCCTAACCATCGTCGCCTTGGTGGGCCGTTACCCCG 463 Query 181 CCAACTAGCTAAT 193 ||||| ||||||| Sbjct 462 CCAACAAGCTAAT 450 >seq83951 Length=556 Score = 181 bits (200), Expect = 2e-43 Identities = 185/243 (76%), Gaps = 14/243 (6%) Strand=Plus/Plus Query 90 CGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTA 149 ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||| || Sbjct 1 CGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTA 60 Query 150 CGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCATC 209 |||||||| |||||| ||||||||| ||||||||| |||||| || || |||| Sbjct 61 TAGATCGTCGGCTTGGTAGGCCATTACCCCACCAACTACCTAATCTAACGCGGGTTCAT- 119 Query 210 TGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGCG 269 | || ||| | || |||||| | | || | |||||||||||||||| Sbjct 120 ------CCCAGGGCGCTAA-------AGCTTTCCCTCTTAAGGCGTATGCGGTATTAGCC 166 Query 270 TCCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCTAGGCATTACTCACCCGTCC 329 |||||||| ||| |||||||| | || |||| || | || |||||||||||| | Sbjct 167 GCCGTTTCCAGCGGTTGTCCCCCACCCCGGGGTAGATCCCCACGCGTTACTCACCCGTGC 226 Query 330 GCC 332 ||| Sbjct 227 GCC 229 >seq131744 Length=222 Score = 174 bits (192), Expect = 3e-41 Identities = 118/130 (91%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| || ||| ||||||| ||| |||||||||| |||||||||||| || | ||| Sbjct 95 CTTTACAACCCTAAGGCCTTCTT-CACGCACGCGGCAT-GGCTGGATCAGGGTTGCCCCC 152 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 153 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 212 Query 121 TGTGACTGAT 130 |||| ||||| Sbjct 213 TGTGGCTGAT 222 >seq38801 Length=4489 Score = 174 bits (192), Expect = 3e-41 Identities = 186/247 (75%), Gaps = 14/247 (6%) Strand=Plus/Plus Query 90 CGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTA 149 ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||| || Sbjct 1 CGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTA 60 Query 150 CGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCATC 209 | ||||| ||||||||| ||||||||| ||||||| |||||||| ||| ||| ||| Sbjct 61 CCGATCGAAGCCTTGGTGGGCCATTACCCCACCAACAAGCTAATCGGACGCGGGCCCAT- 119 Query 210 TGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGCG 269 | || ||| || ||||| | || | | ||||| ||||||||| Sbjct 120 ------CCCAGGGCGATAA-------ATCTTTCCCTCGCAAGGCGTATCGGGTATTAGCC 166 Query 270 TCCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCTAGGCATTACTCACCCGTCC 329 |||||||| ||||| ||| || | ||||| |||| | || |||||||||||| | Sbjct 167 GCCGTTTCCAGCGGTTATTCCCAACCCCAGGGCAGGTTCCCACGCGTTACTCACCCGTGC 226 Query 330 GCCGCTC 336 ||| ||| Sbjct 227 GCCACTC 233 >seq14957 Length=222 Score = 168 bits (186), Expect = 1e-39 Identities = 117/130 (90%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| || ||| ||||||| ||| |||||||||| |||||||||||| || | ||| Sbjct 95 CTTTACAACCCTAAGGCCTTCTT-CACCCACGCGGCAT-GGCTGGATCAGGGTTGCCCCC 152 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 153 ATTGTCCAAGATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 212 Query 121 TGTGACTGAT 130 |||| ||||| Sbjct 213 TGTGGCTGAT 222 >seq303 Length=42796 Score = 156 bits (172), Expect = 9e-36 Identities = 125/151 (83%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106 |||||||||||||||||| |||||||| ||||||||||| |||||| ||| ||| ||| Sbjct 41146 TCAGGCTTTCGCCCATTGCAGAATATTCCTCACTGCTGCCTTCCGTAGAAGTTTGGGCCG 41205 Query 107 TGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGT 166 ||||||||| ||| |||| | | ||||||||||||| | | ||| ||| ||| || ||| Sbjct 41206 TGTCTCAGTCCCAATGTGGCGGGTCATCCTCTCAGATCCGCTACCGATTATCGTCTAGGT 41265 Query 167 GAGCCATTACCTCACCAACTAGCTAATCCGA 197 |||| |||||||||| |||| |||||| || Sbjct 41266 AAGCCTTTACCTCACCTACTAACTAATCAGA 41296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1070427483200