Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq11516 105 1e-20 seq47703 75.2 2e-11 seq671 75.2 2e-11 >seq11516 Length=11496 Score = 105 bits (116), Expect = 1e-20 Identities = 117/154 (76%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 70 GCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGGTGG 129 ||||| || || | ||||| ||||| || ||||||||||| || || |||||||| || Sbjct 10459 GCTTCCTCGAGCAGTTTCTGATGACGGCGCTGCAGCGAGCAGTCACGTTCGCCCAGATGA 10518 Query 130 ATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTGGTCAGG 189 || | | |||||| ||||||| ||| | || || || | || || || ||| |||| Sbjct 10519 ATTGAGCCGCCCTGTCCGTCGGCCAGCAGCTGGACCTCGATATGGCGCGGCTTGCCCAGG 10578 Query 190 TACTTTTCCAGGTAGAC--CATCGGGTTGCCGAA 221 |||||||||| |||||| |||| ||||||||| Sbjct 10579 TACTTTTCCATGTAGACGACATC--GTTGCCGAA 10610 >seq47703 Length=2260 Score = 75.2 bits (82), Expect = 2e-11 Identities = 110/156 (71%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 66 CGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAG 125 ||||||||| || | ||||||||||| || || || | |||||| ||||| |||||||| Sbjct 1685 CGGCGCTTCCTCGATGACCTTCTGGTGGCGGCGCTGGATCGAGCACTCGCGTTCGCCCAG 1744 Query 126 GTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTGGT 185 | || | | ||||||| ||||| | || | ||| | || | || || || | Sbjct 1745 ATAGAGCGTGCGGCCCTGCCCGTCCGCGAGGATTTGGATCTCGATATGGCGCGGCTCTTC 1804 Query 186 CAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAA 221 || | ||||||| | | ||||| | || |||||| Sbjct 1805 CACGAACTTTTCGACGAAGACCCTGTCGTCGCCGAA 1840 >seq671 Length=55457 Score = 75.2 bits (82), Expect = 2e-11 Identities = 122/173 (71%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 66 CGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAG 125 |||||| || |||| ||||||||||| || || || | |||||| ||||| |||||||| Sbjct 36980 CGGCGCCTCCTCCACGACCTTCTGGTGGCGGCGCTGGATCGAGCACTCGCGCTCGCCCAG 36921 Query 126 GTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTGGT 185 ||| | || | ||| ||| | |||| || || || | || | || || || || | Sbjct 36920 GTGCAGGGTCTTGCCGTGGGCATCGGCGAGAACCTGGATCTCGATATGGCG-CGGCTGTT 36862 Query 186 C-AGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAACCAGGCGCCCGCTTCG 237 | | | |||| || | | ||||| | || |||||| | ||||| || ||| Sbjct 36861 CGATGAACTTCTCGATGAAGACCCGCTCGTCGCCGAAGCTGGCGCGGGCCTCG 36809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 734954100300