Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq38801 167 5e-39 seq4610 154 3e-35 seq303 145 2e-32 seq83951 136 8e-30 seq131744 134 3e-29 seq14957 131 3e-28 >seq38801 Length=4489 Score = 167 bits (184), Expect = 5e-39 Identities = 186/249 (75%), Gaps = 17/249 (7%) Strand=Plus/Plus Query 56 CGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTA 115 |||||||||||||||||||||||||||||| |||||| | ||| |||||||| || |||| Sbjct 1 CGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTA 60 Query 116 CCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 ||||||| | |||||||||| |||| | ||||||| | |||||||| |||| ||||||| Sbjct 61 CCGATCGAAGCCTTGGTGGGCCATTACCCCACCAACAAGCTAATCGGACGCGGGCCCATC 120 Query 176 TTTCAGCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAG 235 ||||||||||||| || || | | ||| |||||||| Sbjct 121 CCAGGGCGATAAATCTTT---------------CCCTCGCAAGGC-GTATCGGGTATTAG 164 Query 236 CGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCG 295 | |||||||| |||||||| | | |||||||| | |||| |||||||||||| Sbjct 165 CCGCCGTTTCCAGCGGTTATTCCCAACCCCAGGGCAGGTT-CCCACGCGTTACTCACCCG 223 Query 296 TCCGCCACT 304 | ||||||| Sbjct 224 TGCGCCACT 232 >seq4610 Length=4342 Score = 154 bits (170), Expect = 3e-35 Identities = 150/193 (78%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| | | |||||||| |||||| || |||||||||||||||||| Sbjct 608 GGCATGGCTGGATCAGGCCTCCGCCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTAG 549 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| ||||| | || |||||||| | ||| | || Sbjct 548 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCCCCCTCTCAGGGCCCCTAACCAT 489 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||||||| ||| | | ||||| | ||||| | ||| | ||||| | Sbjct 488 CGTCGCCTTGGTGGGCCGTTACCCCGCCAACAAGCTAATGGTACGCATGGCCATCCCTGT 429 Query 181 GCGATAAATCTTT 193 |||||||||||| Sbjct 428 CCGATAAATCTTT 416 >seq303 Length=42796 Score = 145 bits (160), Expect = 2e-32 Identities = 121/148 (82%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||||| |||| ||||||| ||||| || ||||||||||| |||||| ||| ||||||| Sbjct 41146 TCAGGCTTTCGCCCATTGCAGAATATTCCTCACTGCTGCCTTCCGTAGAAGTTTGGGCCG 41205 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 |||||||||||||||||||| | ||| |||||||| | ||||||||| ||| || ||| Sbjct 41206 TGTCTCAGTCCCAATGTGGCGGGTCATCCTCTCAGATCCGCTACCGATTATCGTCTAGGT 41265 Query 133 GGGCTATTATCTCACCAACTACCTAATC 160 || ||| |||||| |||| |||||| Sbjct 41266 AAGCCTTTACCTCACCTACTAACTAATC 41293 >seq83951 Length=556 Score = 136 bits (150), Expect = 8e-30 Identities = 113/138 (82%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 56 CGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTA 115 |||||||||||||||||||||||||||||| |||||| | ||| |||||||| || |||| Sbjct 1 CGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTA 60 Query 116 CCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 ||||||||||||||| ||| |||| | |||||||||||||||| |||| | |||| Sbjct 61 TAGATCGTCGGCTTGGTAGGCCATTACCCCACCAACTACCTAATCTAACGCGGGTTCATC 120 Query 176 TTTCAGCGATAAATCTTT 193 ||| |||| |||| Sbjct 121 CCAGGGCGCTAAAGCTTT 138 >seq131744 Length=222 Score = 134 bits (148), Expect = 3e-29 Identities = 85/92 (92%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct 127 GGCATGGCTGGATCAGGGTTGCCCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 186 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGC 92 ||||||||||||||||||||||||| |||||| Sbjct 187 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGC 218 >seq14957 Length=222 Score = 131 bits (144), Expect = 3e-28 Identities = 84/92 (91%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||||||| |||||||||| ||| || ||||||||||||||||||||| Sbjct 127 GGCATGGCTGGATCAGGGTTGCCCCCATTGTCCAAGATTCCCCACTGCTGCCTCCCGTAG 186 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGC 92 ||||||||||||||||||||||||| |||||| Sbjct 187 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGC 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 996935447040