Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq72888 107 2e-21 seq4610 98.7 8e-19 >seq72888 Length=316 Score = 107 bits (118), Expect = 2e-21 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| ||||||| |||||| | | |||||||||||| |||||||||||||||||| Sbjct 184 CCATTGTAGCACGTGTGTAGCCCTGCGCGTAAGGGCCATGATGACTTGACGTCATCCCCA 125 Query 143 CCTTCCTCCGGTTTGTCAC 161 ||||||||||||||| ||| Sbjct 124 CCTTCCTCCGGTTTGACAC 106 >seq4610 Length=4342 Score = 98.7 bits (108), Expect = 8e-19 Identities = 118/158 (75%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||| ||||||||| | ||||| ||| || ||| ||| || ||||||||| || Sbjct 1520 TCGGGTTGCAGACCCCGATCCGAACTGTGACCGGTTTTGTGG-ATCCGCTCCCCCTTACG 1462 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || |||| ||| ||||| |||||||| ||||||| |||| | |||||||| Sbjct 1461 GGGTGGCTTCCCGCTGTACCGGCCATTGTAGCACGTGTGTGGCCCAGGACGTAAGGGCCG 1402 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTG 157 ||| || |||||||| |||||||||||||| ||||||| Sbjct 1401 TGATGATTTGACGTCGTCCCCACCTTCCTCGCGGTTTG 1364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415408839300