Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq32575 282 7e-74 seq145483 241 2e-61 seq4610 178 2e-42 seq303 86.0 1e-14 seq131744 84.2 4e-14 seq14957 84.2 4e-14 >seq32575 Length=309 Score = 282 bits (312), Expect = 7e-74 Identities = 228/276 (83%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||||||||||||||||||| | | |||| ||||||||||||| ||||| Sbjct 34 CCCACGCTTTCGCGCCTCAGCGTCAGTTGCGGGCCAGGTGACCGCCTTCGCCACCGGTGT 93 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || ||| ||||||||| |||||||| |||||| ||||||||| ||||||| |||| Sbjct 94 TCTTCCCAATATCTACGAATTTCACCTCTACACTGGGAATTCCGTCACCCTCTCCCGCAC 153 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 |||||| || |||||||||| ||| | |||||||||| |||||| ||||||| Sbjct 154 TCAAGACAATCAGTTTCAAAGGCACGTCCCAGGTTGAGCCCGGGCCTTTCACCTCTGACT 213 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 || | |||||||| |||||||||| |||| |||||||| | |||||||||| ||| || Sbjct 214 TGACCGTCCGCCTACGCGCCCTTTACGCCCAGTAAATCCGAACAACGCTTGCCCCCTCCG 273 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGC 276 |||||||||||||||||||||| ||||||||| ||| Sbjct 274 TATTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGC 309 >seq145483 Length=309 Score = 241 bits (266), Expect = 2e-61 Identities = 219/276 (79%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||||||||||||||||| | | |||| ||||||||||||| ||||| Sbjct 34 CCCACGCTTTCGCGCCTCAGCGTCAGTACCGGACCAGATGGCCGCCTTCGCCACCGGTGT 93 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || ||| ||||||||| |||||||| |||||| ||||||||| ||||| | | || Sbjct 94 TCTTCCTAATATCTACGAATTTCACCTCTACACTAGGAATTCCGCCATCCTCTTCCGGAC 153 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || ||| | |||||| | | || | | ||||||||||| |||||| || ||| Sbjct 154 TCTAGATTATCAGTTTTAGAGGCCGTTCCTAGGTTGAGCCCAGGCCTTTCACCCCTAACT 213 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 || | |||||||| |||||||||| |||| ||| |||| | |||||||||| ||| || Sbjct 214 TGATATTCCGCCTACGCGCCCTTTACGCCCAGTAATTCCGAACAACGCTTGCCCCCTCCG 273 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGC 276 |||||||||||||||||||||| ||||||||| ||| Sbjct 274 TATTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGC 309 >seq4610 Length=4342 Score = 178 bits (196), Expect = 2e-42 Identities = 222/294 (76%), Gaps = 8/294 (3%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTT-ACTGTCCAGCAATCCGCCTTCGCCACTGGTG 59 |||||||||||| | ||||||||||| || || || | | |||||||| | |||| Sbjct 977 CCCACGCTTTCGTCCATCAGCGTCAGTACACGGTTG-GCGACCTGCCTTCGCGATCGGTG 919 Query 60 TTCCTCCGT-ATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGC 118 ||| | || ||||||| ||||||||||||||||| |||||| ||| | || | Sbjct 918 TTC-TATGTGATATCTATGCATTTCACCGCTACACCACATATTCCGGCCGCCCCACCGTC 860 Query 119 ACTCAAGAAAAACAGTTTCAAATGCAGG-CTATGGGTTGAGCCCATAGT-TTTCACATCT 176 |||||||| |||| |||| ||| ||| || ||||||| ||| |||||| || Sbjct 859 ACTCAAGACCGCCAGTATCAAGGGCACCTCTACGG-TTGAGCCGC-AGTATTTCACCCCT 802 Query 177 GACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACC 236 ||||| | ||||||||| ||||||| ||||||| | ||||||||||||| | || Sbjct 801 GACTTAACGGCCCGCCTACGGACCCTTTAAACCCAATGATTCCGGATAACGCTCGGACCC 742 Query 237 TACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 | |||||||||||||||||||||||| ||||||||| ||||||| | |||| Sbjct 741 TCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTCCTTATTCTTACGGTA 688 >seq303 Length=42796 Score = 86.0 bits (94), Expect = 1e-14 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 191 CCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCG 250 |||||| | |||||| |||| | | ||||||||||||| || || ||| |||||||| Sbjct 40962 CCTACAAACGCTTTACGCCCAGTCATTCCGGATAACGCTCGCATCCCCCGTCTTACCGCG 41021 Query 251 GCTGCTGGCACGTAGTTAGCCG 272 |||||||||||| ||||||||| Sbjct 41022 GCTGCTGGCACGGAGTTAGCCG 41043 >seq131744 Length=222 Score = 84.2 bits (92), Expect = 4e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 224 AACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||| ||| |||||||||||||||||||||||| ||||||||| ||||| ||| Sbjct 1 AACGCTTGCCCCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTC 59 >seq14957 Length=222 Score = 84.2 bits (92), Expect = 4e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 224 AACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||| ||| |||||||||||||||||||||||| ||||||||| ||||| ||| Sbjct 1 AACGCTTGCCCCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTC 59 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 827622225990