Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq80947 132 3e-29 seq104763 118 7e-25 seq9707 113 3e-23 >seq80947 Length=217 Score = 132 bits (146), Expect = 3e-29 Identities = 115/139 (83%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 212 TACCTTTTATCCGTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGACCGA 153 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-A 119 |||||| ||||||| | ||| ||||||||| ||| ||| ||| |||||||||||| | Sbjct 152 CTTTCGTCTCTGCTCGAACTGTCGCTCTCGCAGTCAGGCAGGCTTATGCCATTGCACTCA 93 Query 120 TCA-CTACGATTTCCGACC 137 || || ||||||||||| Sbjct 92 ACAGCT--GATTTCCGACC 76 >seq104763 Length=217 Score = 118 bits (130), Expect = 7e-25 Identities = 111/139 (80%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||| | |||||||||||||||| || Sbjct 6 TACCTTTTATCCGTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGA 65 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-A 119 |||||| ||||||| | ||| | ||||||| ||| || ||| |||||||||||| | Sbjct 66 CTTTCGTCTCTGCTCGACCTGTCGGTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCA 125 Query 120 TCACTACGATTTCCGACCG 138 || |||| |||||||| Sbjct 126 ACA-GCCGATGTCCGACCG 143 >seq9707 Length=1225 Score = 113 bits (124), Expect = 3e-23 Identities = 98/119 (82%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| | | |||||||||||||||| ||| Sbjct 518 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATGCCCTA 459 Query 61 CTTTCGCATCTGCTCTAGTTGT-TGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| | ||| || ||| ||| ||| || |||||| | ||| |||||||||||| Sbjct 458 CTTTCGTACCTGTTCGGCCTGTATGC-CTCACAGTCAAGCGCCCTTGTGCCATTGCACT 401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351515923000