Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq104763 141 9e-32 seq80947 141 9e-32 seq9707 113 4e-23 >seq104763 Length=217 Score = 141 bits (156), Expect = 9e-32 Identities = 125/156 (80%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | ||||||||||||||||| || |||||| ||| Sbjct 18 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGGCCGACTTTCGTCTCTG 77 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| | ||| ||||||||||| || ||||||||||||||||| | | ||||||| Sbjct 78 CTCGACCTGTCGGTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGATGTC 137 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 138 CGACCGGCTTGAGCCCACCATCGCGCGCCTCCGTTA 173 >seq80947 Length=217 Score = 141 bits (156), Expect = 9e-32 Identities = 125/156 (80%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | |||||||||||||||||||| |||||| ||| Sbjct 200 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGACCGACTTTCGTCTCTG 141 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| | ||| |||||||||||| || ||||||||||||||||| | | ||| || Sbjct 140 CTCGAACTGTCGCTCTCGCAGTCAGGCAGGCTTATGCCATTGCACTCAACAGCTGATTTC 81 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||| | ||| ||||||| || ||||||||| Sbjct 80 CGACCAGCTTGAGCCTACCTTCGCGCGCCTCCGTTA 45 >seq9707 Length=1225 Score = 113 bits (124), Expect = 4e-23 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 |||||||||||||||||||| | ||||||||||||||||||| ||| |||||| ||||| Sbjct 505 TTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATGCCCTACTTTCGTACCTGT 446 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCC 144 ||| | || ||| ||||||||| ||| |||||||||||| | |||| | || Sbjct 445 TCGGCCTGTATGCCTCACAGTCAAGCGCCCTTGTGCCATTGCACTCTGCGCACGGTTGCC 386 Query 145 GACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | |||| | || ||||| | ||||||||| Sbjct 385 AAGCGTGCTGAGGGCACCTTTGGAAGCCTCCGTTA 351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472926986280