Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq9707 302 7e-80 seq48741 205 1e-50 seq75483 196 7e-48 seq303 181 2e-43 seq115004 159 5e-37 >seq9707 Length=1225 Score = 302 bits (334), Expect = 7e-80 Identities = 232/275 (84%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 1 CGAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCA 60 || || ||| |||| ||||| ||||||||||| |||||||| ||| || | ||| ||| Sbjct 854 CGCGGCGGGTTTCGCGCTTATATGCCTTCAGCGCTTATCCCGTCCCGACGTGGCTACCCG 795 Query 61 GCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120 || |||| | |||| | ||||| |||||||||| ||| |||| ||||||||||||||| Sbjct 794 GCGATGCCCCTGGCGGGACAACCGGTGCACCAGCGGTCGGTCCGGCCCGGTCCTCTCGTA 735 Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCG 180 ||| || | || || ||||||| || |||||| | ||||| |||||||||||||| Sbjct 734 CTAGGGCCGGCACCGCTCAAATCTCTGACGCCCGCAGTAGATAGAGACCGAACTGTCTCA 675 Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 674 CGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACCCTTGGGAC 615 Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || || ||||||||||||| ||||||||||||||| Sbjct 614 CTTCTCCAGCCCCAGGATGTGACGAGCCGACATCG 580 >seq48741 Length=533 Score = 205 bits (226), Expect = 1e-50 Identities = 158/188 (84%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||||||| ||||||||||||||||| ||||||| ||| || ||||| ||| | Sbjct 344 GAGGGGGGCTTCCCGCTTAGATGCCTTCAGCGGTTATCCCGTCCGCACATAGCTACCCGG 403 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 |||||| |||| ||||| ||| |||||||||| |||||||||||||||||||||| Sbjct 404 CTATGCGGCTGGCGCCACAACCGGTCCACCAGAGGTGCGTCCATCCCGGTCCTCTCGTAC 463 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || |||||||||||||||| | || || |||||| | |||||||||||||||||||| | Sbjct 464 TAGGGACAGCTCCTCTCAAGTCTCGAACACCCACGGCAGATAGGGACCGAACTGTCTCAC 523 Query 182 GACGTTCT 189 |||||||| Sbjct 524 GACGTTCT 531 >seq75483 Length=505 Score = 196 bits (216), Expect = 7e-48 Identities = 156/188 (83%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||| ||| |||||||||| |||||| ||||||||||| |||||||| ||| | Sbjct 190 GAGGGGGGTTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTTCCGCACTTAGCTACCCGG 131 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 || ||| |||| ||||| ||| |||||||||| |||||||||||||||||||||| Sbjct 130 CTGTGCCGCTGGCGCGACAACCGGTCCACCAGAGGTGCGTCCATCCCGGTCCTCTCGTAC 71 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || |||||| ||||||||| | || || |||||| | |||||||||||||||||||| | Sbjct 70 TAGGGACAGATCCTCTCAAGTCTCGAACACCCACGGCAGATAGGGACCGAACTGTCTCAC 11 Query 182 GACGTTCT 189 |||||||| Sbjct 10 GACGTTCT 3 >seq303 Length=42796 Score = 181 bits (200), Expect = 2e-43 Identities = 141/168 (84%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 108 CGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGA 167 |||||||||||||||| | | | |||| || ||||| ||| ||||| ||| Sbjct 42061 CGGTCCTCTCGTACTAGAAAAATTACTTCTCTGTTTATTTACGCTCACATTGGATACGGA 42120 Query 168 CCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCC 227 |||||||||||| |||||||||||||||||||| |||||| |||| |||||||||||| | Sbjct 42121 CCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTGCCGCTTTCATGGGCGAACAGAC 42180 Query 228 CAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||||||||||||| | ||||||||||| ||||||||||||||| Sbjct 42181 CAACCCTTGGGACCTACTACCGCCCCAGGATGCGACGAGCCGACATCG 42228 >seq115004 Length=221 Score = 159 bits (176), Expect = 5e-37 Identities = 105/116 (91%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||||||||||||||||||| ||||||||| |||||||||| ||| || ||||||| ||| Sbjct 216 GATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCACGTACCGCTTTAATTGGC 157 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||| |||||||||||||| || ||||||||||||| || |||||||||||| Sbjct 156 GAACAGCCAAACCCTTGGGACCTGCTCCAGCCCCAGGATGCGATGAGCCGACATCG 101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 779690436840