Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq5712 127 3e-27 seq2365 82.4 1e-13 >seq5712 Length=11052 Score = 127 bits (140), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 82 CCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCA-CTCGCTT 140 ||| | ||||| | || || |||||| | | ||||| || || ||||| | || || Sbjct 8586 CCATCTTGAGCGCGGCCAGAAAGGCTGACTGG-GGAATCTCGACATTGCCGATCTGGCG- 8529 Query 141 CATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACC 200 |||||| || || || ||||| |||||||| |||||||||||||| ||||| ||||| || Sbjct 8528 CATGCGCTTCTTGCCTGCCTTCTGCTTCTCCAGCAGCTTGCGCTTGCGGCTGACGTCGCC 8469 Query 201 GCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGAT 260 ||| ||||| ||||| ||||| ||| | || || ||||| ||||| || | Sbjct 8468 GCCATAGCACTTGGCGGTTACGTCCTTGCGCAGGGCGGAGACGGTCTCGCGCGCGATCAC 8409 Query 261 CTGCCCGCCAATGGCGGCCTGGATCGCGA 289 || ||||| || |||||||||||||||| Sbjct 8408 CTTGCCGCCGATCGCGGCCTGGATCGCGA 8380 >seq2365 Length=9148 Score = 82.4 bits (90), Expect = 1e-13 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 115 GGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGC 174 ||||| || || ||||| || | |||||| || || |||||||| ||||| || || Sbjct 2219 GGAATCTCGACATTGCCGACCTGGCGCATGCGCTTCTTGCCGGCCTTCTGCTTTTCCAGA 2278 Query 175 AGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGA 234 |||||||| || || || || ||||||||||| ||||| |||| ||| | || Sbjct 2279 AGCTTGCGTTTGCGTGAGACATCGCCGCCGTAGCACTTGGCGGTGACGTCCTTGCGCAGG 2338 Query 235 GCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGCGGCCTGGATCGCGA 289 || | || |||||| | | || ||||| || || ||||||||||||| Sbjct 2339 GCGGAAATGGTTTCCCGCGCCACCACCTTGCCGCCGATCGCCGCCTGGATCGCGA 2393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 840404036430